Histopathology data for Smco2

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #3 Skeletal muscle [MA:0003148] 0 0
HOM F #3 Skin [MA:0000151] 0 0
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM F #3 Lung [MA:0000415] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HOM M #1 Lung [MA:0000415] 0 0
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM F #3 Small intestine [MA:0000337] 0 0
HOM F #2 Ovary [MA:0000384] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HOM M #1 Epididymis [MA:0000397] 0 0
HOM F #3 Adrenal gland [MA:0000116] 0 0
HOM F #2 Lymph node [MA:0000139] 0 0
HOM M #4 Lung [MA:0000415] 0 0
HOM M #4 Pancreas [MA:0000120] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM M #1 Prostate gland [MA:0000404] 0 0
HOM M #1 Small intestine [MA:0000337] 0 0
HOM F #3 Epididymis [MA:0000397] Not applicable
HOM F #3 Femur [MA:0001359] 0 0
HOM F #2 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Large intestine [MA:0000333] 0 0
HOM F #2 Salivary gland [MA:0000346] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HOM M #4 Large intestine [MA:0000333] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HOM F #3 Gall bladder [MA:0000356] 0 0
HOM M #1 Large intestine [MA:0000333] 0 0
HOM M #1 Skeletal muscle [MA:0003148] 0 0
HOM M #1 Pancreas [MA:0000120] 0 0
HOM F #2 Mammary gland [MA:0000145] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HOM F #2 Bone marrow [MA:0000134] 0 0
HOM M #4 Thyroid 0 0
HOM F #3 Eye [MA:0000261] 0 0
HOM F #2 Prostate gland [MA:0000404] Not applicable
HOM F #3 Stomach [MA:0000353] 0 0
HOM M #1 Lymph node [MA:0000139] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM F #2 Urinary bladder [MA:0000380] 0 0
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM F #3 Esophagus [MA:0000352] 0 0
HOM F #3 Thymus [MA:0000142] 0 0
HOM F #2 Spleen [MA:0000141] 0 0
HOM M #1 Seminal vesicle [MA:0000410] 0 0
HOM F #2 Optic II nerve [MA:0001097] 0 0
HOM F #3 Testis [MA:0000411] Not applicable
HOM F #2 Skeletal muscle [MA:0003148] 0 0
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Pancreas [MA:0000120] 0 0
HOM M #1 Ovary [MA:0000384] Not applicable
HOM M #4 Kidney [MA:0000368] 0 0
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM F #3 Ovary [MA:0000384] 0 0
HOM F #3 Uterus [MA:0000389] 0 0
HOM M #1 Mammary gland [MA:0000145] Not applicable
HOM M #4 Small intestine [MA:0000337] 0 0
HOM F #3 Brain [MA:0000168] 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HOM M #1 Urinary bladder [MA:0000380] 0 0
HOM F #2 Liver [MA:0000358] 0 0
HOM F #3 Seminal vesicle [MA:0000410] Not applicable
HOM F #2 Spinal cord [MA:0000216] 0 0
HOM F #2 Epididymis [MA:0000397] Not applicable
HOM F #3 Heart [MA:0000072] 0 0
HOM F #3 Salivary gland [MA:0000346] 0 0
HOM F #2 Pancreas [MA:0000120] 0 0
HOM F #2 Kidney [MA:0000368] 0 0
HOM M #1 Heart [MA:0000072] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HOM F #2 Gall bladder [MA:0000356] 0 0
HOM M #1 Bone marrow [MA:0000134] 0 0
HOM F #3 Liver [MA:0000358] 0 0
HOM M #1 Salivary gland [MA:0000346] 0 0
HOM F #3 Mammary gland [MA:0000145] 0 0
HOM M #1 Liver [MA:0000358] 0 0
HOM F #3 Bone marrow [MA:0000134] 0 0
HOM M #1 Optic II nerve [MA:0001097] 0 0
HOM M #1 Spleen [MA:0000141] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HOM F #3 Trachea [MA:0000441] 0 0
HOM F #2 Lung [MA:0000415] 0 0
HOM M #1 Thymus [MA:0000142] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM M #1 Brain [MA:0000168] 0 0
HOM F #3 Urinary bladder [MA:0000380] 0 0
HOM M #1 Trachea [MA:0000441] 0 0
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM F #2 Skin [MA:0000151] 0 0
HOM F #2 Small intestine [MA:0000337] 0 0
HOM F #2 Adrenal gland [MA:0000116] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HOM F #3 Lymph node [MA:0000139] 0 0
HOM F #3 Thyroid 0 0
HOM M #1 Spinal cord [MA:0000216] 0 0
HOM M #4 Liver [MA:0000358] 0 0
HOM F #2 Femur [MA:0001359] 0 0
HOM M #4 Thymus [MA:0000142] 0 0
HOM M #1 Uterus [MA:0000389] Not applicable
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM M #1 Testis [MA:0000411] 0 0
HOM F #2 Trachea [MA:0000441] 0 0
HOM M #1 Esophagus [MA:0000352] 0 0
HOM M #1 Eye [MA:0000261] 0 0
HOM M #1 Sciatic nerve [MA:0001172] 0 0
HOM F #2 Uterus [MA:0000389] 0 0
HOM F #2 Brain [MA:0000168] 0 0
HOM F #3 Spinal cord [MA:0000216] 0 0
HOM M #1 Stomach [MA:0000353] 0 0
HOM M #1 Kidney [MA:0000368] 0 0
HOM F #3 Kidney [MA:0000368] 0 0
HOM M #4 Uterus [MA:0000389] Not applicable
HOM F #2 Thyroid 0 0
HOM F #2 Seminal vesicle [MA:0000410] Not applicable
HOM F #2 Heart [MA:0000072] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM M #1 Femur [MA:0001359] 0 0
HOM F #3 Prostate gland [MA:0000404] Not applicable
HOM M #1 Gall bladder [MA:0000356] 0 0
HOM F #2 Eye [MA:0000261] 0 0
HOM F #3 Optic II nerve [MA:0001097] 0 0
HOM F #2 Stomach [MA:0000353] 0 0
HOM M #1 Thyroid 0 0
HOM F #2 Thymus [MA:0000142] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM F #3 Spleen [MA:0000141] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM M #1 Skin [MA:0000151] 0 0
HOM M #1 Adrenal gland [MA:0000116] 0 0
HOM F #2 Testis [MA:0000411] Not applicable
HOM F #3 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM F #2 Esophagus [MA:0000352] 0 0
HOM F #2 Large intestine [MA:0000333] 0 0

Associated histopathology images

The IMPC Newsletter

Get highlights of the most important data releases, news and events, delivered straight to your email inbox

Subscribe to newsletter