Histopathology data for Ptchd3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #3 Esophagus [MA:0000352]
HOM M #4 Tongue [MA:0000347]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Lung [MA:0000415]
HOM F #1 Stomach [MA:0000353]
HOM F #2 Spinal cord [MA:0000216]
HOM M #3 Epididymis [MA:0000397]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #1 Heart [MA:0000072]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #3 Stomach [MA:0000353]
HOM M #4 Eye [MA:0000261]
HOM M #3 Heart [MA:0000072]
HOM M #4 Thyroid
HOM M #3 Pancreas [MA:0000120]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #3 Salivary gland [MA:0000346]
HOM M #4 Testis [MA:0000411]
HOM M #4 Gall bladder [MA:0000356]
HOM M #3 Tooth [MA:0000348]
HOM F #1 Pancreas [MA:0000120]
HOM F #2 Large intestine [MA:0000333]
HOM M #3 Spinal cord [MA:0000216]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Liver [MA:0000358]
HOM M #4 Spleen [MA:0000141]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #1 Salivary gland [MA:0000346]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #4 Sternum [MA:0001331]
HOM F #1 Esophagus [MA:0000352]
HOM F #1 Large intestine [MA:0000333]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #4 Large intestine [MA:0000333]
HOM M #4 Heart [MA:0000072]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Heart [MA:0000072]
HOM F #2 Esophagus [MA:0000352]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Tooth [MA:0000348]
HOM F #1 Brain [MA:0000168]
HOM M #4 Lymph node [MA:0000139]
HOM M #3 Eye [MA:0000261]
HOM F #2 Adrenal gland [MA:0000116]
HOM M #3 Tibia [MA:0001361]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Lung [MA:0000415]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #1 Thyroid
HOM M #4 Liver [MA:0000358]
HOM M #4 Pancreas [MA:0000120]
HOM F #2 Gall bladder [MA:0000356]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #1 Skin [MA:0000151]
HOM F #1 Kidney [MA:0000368]
HOM F #1 Bone [MA:0001459]
HOM M #4 Bone [MA:0001459]
HOM F #2 Eye [MA:0000261]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Thymus [MA:0000142]
HOM M #3 Testis [MA:0000411]
HOM M #3 Gall bladder [MA:0000356]
HOM M #4 Prostate gland [MA:0000404]
HOM M #4 Spinal cord [MA:0000216]
HOM F #2 Stomach [MA:0000353]
HOM F #1 Tongue [MA:0000347]
HOM M #4 Kidney [MA:0000368]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Knee joint [MA:0000471]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Trachea [MA:0000441]
HOM F #1 Lymph node [MA:0000139]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #1 Spinal cord [MA:0000216]
HOM M #4 Small intestine [MA:0000337]
HOM F #2 Ear [MA:0000236]
HOM M #3 Bone marrow [MA:0000134]
HOM M #3 Sternum [MA:0001331]
HOM F #2 Ovary [MA:0000384]
HOM M #3 Trachea [MA:0000441]
HOM F #2 Thymus [MA:0000142]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #1 Thymus [MA:0000142]
HOM F #2 Mammary gland [MA:0000145]
HOM F #1 Ovary [MA:0000384]
HOM M #4 Skin [MA:0000151]
HOM M #4 Brain [MA:0000168]
HOM F #2 Bone [MA:0001459]
HOM F #1 Skeletal muscle [MA:0003148]
HOM F #1 Spleen [MA:0000141]
HOM F #2 Tibia [MA:0001361]
HOM M #4 Salivary gland [MA:0000346]
HOM F #2 Uterus [MA:0000389]
HOM F #1 Sternum [MA:0001331]
HOM F #1 Mammary gland [MA:0000145]
HOM M #3 Knee joint [MA:0000471]
HOM M #3 Thyroid
HOM M #3 Bone [MA:0001459]
HOM F #1 Tibia [MA:0001361]
HOM F #1 Uterus [MA:0000389]
HOM M #4 Femur [MA:0001359]
HOM M #3 Kidney [MA:0000368]
HOM M #4 Esophagus [MA:0000352]
HOM M #3 Lymph node [MA:0000139]
HOM M #4 Tibia [MA:0001361]
HOM F #2 Sternum [MA:0001331]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #3 Prostate gland [MA:0000404]
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #2 Femur [MA:0001359]
HOM M #4 Epididymis [MA:0000397]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #3 Large intestine [MA:0000333]
HOM F #1 Femur [MA:0001359]
HOM M #3 Lung [MA:0000415]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Brain [MA:0000168]
HOM F #2 Pancreas [MA:0000120]
HOM F #2 Liver [MA:0000358]
HOM F #1 Tooth [MA:0000348]
HOM F #2 Spleen [MA:0000141]
HOM F #2 Skin [MA:0000151]
HOM F #1 Eye [MA:0000261] 3 0 unilateral unilateral anophthalmia or microphthalmia
HOM F #1 Gall bladder [MA:0000356]
HOM F #2 Brain [MA:0000168]
HOM F #2 Small intestine [MA:0000337]
HOM F #2 Urinary bladder [MA:0000380]
HOM F #2 Thyroid
HOM M #3 Thymus [MA:0000142]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #3 Femur [MA:0001359]
HOM F #2 Trachea [MA:0000441]
HOM M #3 Ear [MA:0000236]
HOM M #4 Tooth [MA:0000348]
HOM F #2 Lymph node [MA:0000139]
HOM M #3 Skin [MA:0000151]
HOM F #1 Bone marrow [MA:0000134]
HOM M #4 Bone marrow [MA:0000134]
HOM M #3 Spleen [MA:0000141]
HOM F #2 Kidney [MA:0000368]
HOM F #2 Knee joint [MA:0000471]
HOM M #3 Liver [MA:0000358]
HOM M #3 Small intestine [MA:0000337]
HOM F #2 Tongue [MA:0000347]
HOM M #4 Stomach [MA:0000353]
HOM F #2 Lung [MA:0000415]
HOM F #1 Brown adipose tissue [MA:0000057]

Associated histopathology images

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