Histopathology data for Pax7

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HET F #2 Ovary [MA:0000384] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Pancreas [MA:0000120] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Thymus [MA:0000142] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Lung [MA:0000415] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Eye with optic nerve normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Thyroid normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Spleen [MA:0000141] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Uterus [MA:0000389] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Spinal cord [MA:0000216] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Esophagus [MA:0000352] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Small intestine [MA:0000337] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Uterus [MA:0000389] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Lymph node [MA:0000139] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Kidney [MA:0000368] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Testes normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Lung [MA:0000415] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Stomach [MA:0000353] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Ovary [MA:0000384] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Small intestine [MA:0000337] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Brain [MA:0000168] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Skin [MA:0000151] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Gall bladder [MA:0000356] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Prostate normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Stomach [MA:0000353] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Spleen [MA:0000141] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Eye with optic nerve normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Eye with optic nerve normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Pancreas [MA:0000120] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Prostate normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Lymph node [MA:0000139] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Spinal cord [MA:0000216] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Trachea [MA:0000441] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Uterus [MA:0000389] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Lymph node [MA:0000139] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Epididymis [MA:0000397] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Lung [MA:0000415] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Ovary [MA:0000384] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Thyroid normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Brain [MA:0000168] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Pancreas [MA:0000120] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Spleen [MA:0000141] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Gall bladder [MA:0000356] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Liver [MA:0000358] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Kidney [MA:0000368] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Heart [MA:0000072] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Large intestine [MA:0000333] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Epididymis [MA:0000397] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Liver [MA:0000358] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Kidney [MA:0000368] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Mammary gland [MA:0000145] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Lung [MA:0000415] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Thymus [MA:0000142] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Stomach [MA:0000353] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Pancreas [MA:0000120] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Mammary gland [MA:0000145] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Ovary [MA:0000384] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Trachea [MA:0000441] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Large intestine [MA:0000333] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Esophagus [MA:0000352] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Prostate normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Trachea [MA:0000441] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Brain [MA:0000168] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Epididymis [MA:0000397] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Mammary gland [MA:0000145] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Kidney [MA:0000368] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Eye with optic nerve normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Spinal cord [MA:0000216] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Thyroid normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Testes normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Testes normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Lymph node [MA:0000139] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Skin [MA:0000151] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Small intestine [MA:0000337] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Liver [MA:0000358] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Brain [MA:0000168] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Spinal cord [MA:0000216] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Heart [MA:0000072] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Thymus [MA:0000142] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Heart [MA:0000072] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Small intestine [MA:0000337] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Liver [MA:0000358] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Esophagus [MA:0000352] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Large intestine [MA:0000333] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Gall bladder [MA:0000356] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Skin [MA:0000151] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Thymus [MA:0000142] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Epididymis [MA:0000397] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Uterus [MA:0000389] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Spleen [MA:0000141] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Prostate normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Thyroid normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Testes normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Mammary gland [MA:0000145] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Stomach [MA:0000353] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Large intestine [MA:0000333] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #4 Esophagus [MA:0000352] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Gall bladder [MA:0000356] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Skin [MA:0000151] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Trachea [MA:0000441] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET M #3 Heart [MA:0000072] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #1 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0 normal MPATH:458 normal
HET F #2 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0 normal MPATH:458 normal

Associated histopathology images

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