Histopathology data for Iqgap1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #3 Optic II nerve [MA:0001097] 0 0
HOM M #2 Eye [MA:0000261] 0 0
HOM M #2 Thymus [MA:0000142] 0 0
HOM M #4 Thymus [MA:0000142] 0 0
HOM F #3 Salivary gland [MA:0000346] 0 0
HOM M #2 Trachea [MA:0000441] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM M #4 Liver [MA:0000358] 0 0
HOM M #4 Tibia [MA:0001361] 0 0
HOM M #2 Large intestine [MA:0000333] 0 0
HOM M #4 Small intestine [MA:0000337] 0 0
HOM M #2 Epididymis [MA:0000397] 0 0
HOM M #2 Uterus [MA:0000389] Not applicable
HOM F #3 Knee joint [MA:0000471] 0 0
HOM F #3 Trachea [MA:0000441] 0 0
HOM F #3 Thyroid 0 0
HOM F #3 Gall bladder [MA:0000356] 0 0
HOM F #1 Small intestine [MA:0000337] 0 0
HOM M #2 Knee joint [MA:0000471] 0 0
HOM M #2 Stomach [MA:0000353] 0 0
HOM F #3 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Testis [MA:0000411] Not applicable
HOM M #4 Pancreas [MA:0000120] 0 0
HOM M #2 Sternum [MA:0001331] 3 0 0 0 chronic localized Sternal segment dislocation.
HOM F #3 Eye [MA:0000261] 0 0
HOM M #2 Tibia [MA:0001361] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HOM F #1 Testis [MA:0000411] Not applicable
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM F #3 Bone marrow [MA:0000134] 0 0
HOM F #1 Thymus [MA:0000142] 0 0
HOM M #2 Esophagus [MA:0000352] 0 0
HOM F #1 Mammary gland [MA:0000145] 0 0
HOM F #3 Pancreas [MA:0000120] 0 0
HOM M #2 Tongue [MA:0000347] 0 0
HOM F #1 Pancreas [MA:0000120] 0 0
HOM M #2 Mammary gland [MA:0000145] Not applicable
HOM M #2 Gall bladder [MA:0000356] 0 0
HOM F #1 Spinal cord [MA:0000216] 0 0
HOM F #1 Femur [MA:0001359] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HOM F #3 Esophagus [MA:0000352] 0 0
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM F #3 Brain [MA:0000168] 0 0
HOM M #4 Knee joint [MA:0000471] 0 0
HOM F #1 Thyroid 0 0
HOM F #3 Uterus [MA:0000389] 0 0
HOM M #2 Femur [MA:0001359] 0 0
HOM M #2 Pancreas [MA:0000120] 0 0
HOM F #3 Skeletal muscle [MA:0003148] 0 0
HOM F #3 Tongue [MA:0000347] 0 0
HOM F #3 Skin [MA:0000151] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM F #1 Optic II nerve [MA:0001097] 0 0
HOM F #3 Prostate gland [MA:0000404] Not applicable
HOM F #1 Adrenal gland [MA:0000116] 0 0
HOM M #2 Brain [MA:0000168] 0 0
HOM F #1 Urinary bladder [MA:0000380] 0 0
HOM F #1 Gall bladder [MA:0000356] 0 0
HOM F #3 Small intestine [MA:0000337] 0 0
HOM F #1 Salivary gland [MA:0000346] 0 0
HOM F #1 Spleen [MA:0000141] 0 0
HOM M #2 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Lymph node [MA:0000139] 0 0
HOM F #3 Spleen [MA:0000141] 0 0
HOM M #4 Large intestine [MA:0000333] 0 0
HOM F #1 Lymph node [MA:0000139] 0 0
HOM F #3 Kidney [MA:0000368] 0 0
HOM F #1 Tibia [MA:0001361] 0 0
HOM M #2 Lung [MA:0000415] 0 0
HOM F #3 Tibia [MA:0001361] 0 0
HOM F #1 Kidney [MA:0000368] 0 0
HOM F #1 Tongue [MA:0000347] 0 0
HOM M #2 Salivary gland [MA:0000346] 0 0
HOM F #3 Ovary [MA:0000384] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM F #1 Prostate gland [MA:0000404] Not applicable
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM F #1 Uterus [MA:0000389] 0 0
HOM F #3 Urinary bladder [MA:0000380] 0 0
HOM F #1 Lung [MA:0000415] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM M #2 Lymph node [MA:0000139] 0 0
HOM M #2 Urinary bladder [MA:0000380] 0 0
HOM F #3 Adrenal gland [MA:0000116] 0 0
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Tongue [MA:0000347] 0 0
HOM M #4 Lung [MA:0000415] 0 0
HOM M #2 Liver [MA:0000358] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HOM F #1 Brain [MA:0000168] 0 0
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Large intestine [MA:0000333] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HOM M #2 Testis [MA:0000411] 0 0
HOM F #1 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HOM M #2 Skin [MA:0000151] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HOM F #3 Femur [MA:0001359] 0 0
HOM F #1 Skeletal muscle [MA:0003148] 0 0
HOM M #2 Bone marrow [MA:0000134] 0 0
HOM F #1 Skin [MA:0000151] 0 0
HOM F #1 Seminal vesicle [MA:0000410] Not applicable
HOM F #3 Spinal cord [MA:0000216] 0 0
HOM F #3 Epididymis [MA:0000397] Not applicable
HOM F #1 Ovary [MA:0000384] 0 0
HOM M #4 Uterus [MA:0000389] Not applicable
HOM F #3 Sternum [MA:0001331] 0 0
HOM F #1 Esophagus [MA:0000352] 0 0
HOM F #1 Bone marrow [MA:0000134] 0 0
HOM F #3 Thymus [MA:0000142] 0 0
HOM M #2 Adrenal gland [MA:0000116] 0 0
HOM F #1 Eye [MA:0000261] 0 0
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM M #2 Optic II nerve [MA:0001097] 0 0
HOM F #3 Seminal vesicle [MA:0000410] Not applicable
HOM F #3 Mammary gland [MA:0000145] 0 0
HOM M #2 Thyroid 0 0
HOM F #1 Epididymis [MA:0000397] Not applicable
HOM M #2 Seminal vesicle [MA:0000410] 0 0
HOM F #1 Sternum [MA:0001331] 0 0
HOM M #2 Heart [MA:0000072] 0 0
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM F #3 Heart [MA:0000072] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HOM M #2 Prostate gland [MA:0000404] 0 0
HOM M #4 Kidney [MA:0000368] 0 0
HOM M #4 Sternum [MA:0001331] 0 0
HOM F #1 Knee joint [MA:0000471] 0 0
HOM F #1 Trachea [MA:0000441] 0 0
HOM F #3 Lung [MA:0000415] 0 0
HOM M #2 Small intestine [MA:0000337] 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HOM F #3 Large intestine [MA:0000333] 0 0
HOM M #2 Kidney [MA:0000368] 0 0
HOM M #2 Skeletal muscle [MA:0003148] 0 0
HOM F #3 Stomach [MA:0000353] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HOM M #4 Thyroid 0 0
HOM M #2 Spleen [MA:0000141] 0 0
HOM F #1 Stomach [MA:0000353] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM M #2 Ovary [MA:0000384] Not applicable
HOM F #1 Liver [MA:0000358] 0 0
HOM M #2 Spinal cord [MA:0000216] 0 0
HOM F #1 Heart [MA:0000072] 0 0
HOM F #3 Liver [MA:0000358] 0 0

Associated histopathology images

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