Histopathology data for Hhatl

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #3 Thyroid
HOM M #3 Gall bladder [MA:0000356]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Heart [MA:0000072]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #1 Spleen [MA:0000141]
HOM M #4 Heart [MA:0000072]
HOM F #1 Kidney [MA:0000368]
HOM M #4 Stomach [MA:0000353]
HOM M #4 Spinal cord [MA:0000216]
HOM F #1 Sternum [MA:0001331]
HOM F #2 Spinal cord [MA:0000216]
HOM F #1 Bone marrow [MA:0000134]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Spleen [MA:0000141]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #3 Lung [MA:0000415]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #3 Kidney [MA:0000368]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Skeletal muscle [MA:0003148] 2 1 Moderate multifocal chronic vacuolar degeneration with dropout and regeneration
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #3 Large intestine [MA:0000333]
HOM M #3 Eye [MA:0000261] 1 0 unilateral Mild unilateral superficial cataractous change
HOM F #2 Liver [MA:0000358]
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Large intestine [MA:0000333]
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Pancreas [MA:0000120]
HOM M #3 Bone marrow [MA:0000134]
HOM F #1 Eye [MA:0000261] 1 0 unilateral Unilateral mild superficial stromal cataractous change
HOM F #1 Ovary [MA:0000384]
HOM M #4 Nasal cavity [MA:0000284]
HOM M #4 Salivary gland [MA:0000346]
HOM F #2 Eye [MA:0000261]
HOM F #1 Gall bladder [MA:0000356]
HOM F #2 Tooth [MA:0000348]
HOM M #3 Skeletal muscle [MA:0003148] 2 1 Mild to moderate chronic vacuolar myodegeneration with dropout and regeneration
HOM M #3 Testis [MA:0000411]
HOM M #3 Spinal cord [MA:0000216]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #4 Skin [MA:0000151]
HOM M #3 Prostate gland [MA:0000404]
HOM F #2 Small intestine [MA:0000337]
HOM F #2 Brain [MA:0000168]
HOM M #4 Femur [MA:0001359]
HOM M #3 Thymus [MA:0000142]
HOM F #1 Thymus [MA:0000142]
HOM F #2 Skin [MA:0000151]
HOM M #4 Brain [MA:0000168]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #4 Thyroid
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Lymph node [MA:0000139]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Knee joint [MA:0000471]
HOM F #2 Large intestine [MA:0000333]
HOM M #3 Heart [MA:0000072]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM F #1 Heart [MA:0000072]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #4 Spleen [MA:0000141]
HOM F #2 Uterus [MA:0000389]
HOM F #2 Mammary gland [MA:0000145]
HOM M #3 Knee joint [MA:0000471]
HOM M #3 Trachea [MA:0000441]
HOM F #1 Tongue [MA:0000347] 2 1 Marked chronic vacuolar degeneration, dropout, and regeneration
HOM F #1 Lung [MA:0000415]
HOM F #2 Spleen [MA:0000141]
HOM F #1 Trachea [MA:0000441]
HOM M #3 Esophagus [MA:0000352]
HOM M #4 Liver [MA:0000358]
HOM F #2 Ear [MA:0000236]
HOM M #4 Kidney [MA:0000368]
HOM M #3 Sternum [MA:0001331]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #1 Lymph node [MA:0000139]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Pancreas [MA:0000120]
HOM M #3 Bone [MA:0001459]
HOM M #4 Tongue [MA:0000347] 2 1 Moderate to marked diffuse chronic vacuolar myodegeneration with dropout and regeneration
HOM F #1 Thyroid
HOM M #3 Nasal cavity [MA:0000284]
HOM M #4 Lung [MA:0000415]
HOM F #2 Femur [MA:0001359]
HOM M #4 Thymus [MA:0000142]
HOM F #2 Salivary gland [MA:0000346]
HOM F #1 Bone [MA:0001459]
HOM F #2 Lymph node [MA:0000139] 1 0 focal cortical lymphoid hyperplasia (ddx lymphoma) with subcapsular congestion
HOM M #4 Knee joint [MA:0000471]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #3 Tooth [MA:0000348]
HOM F #1 Salivary gland [MA:0000346]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #3 Femur [MA:0001359]
HOM F #2 Trachea [MA:0000441]
HOM F #1 Tooth [MA:0000348]
HOM F #1 Pancreas [MA:0000120]
HOM M #4 Skeletal muscle [MA:0003148] 2 1 multifocal to coalescing Moderate multifocal chronic vacuolar myodegeneration with regeneration and dropout
HOM M #3 Salivary gland [MA:0000346]
HOM F #2 Knee joint [MA:0000471]
HOM M #4 Lymph node [MA:0000139]
HOM M #4 Ear [MA:0000236]
HOM M #4 Bone [MA:0001459]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #4 Prostate gland [MA:0000404]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM F #1 Femur [MA:0001359]
HOM F #1 Esophagus [MA:0000352]
HOM F #1 Small intestine [MA:0000337]
HOM M #3 Urinary bladder [MA:0000380]
HOM M #4 Sternum [MA:0001331]
HOM F #1 Uterus [MA:0000389]
HOM F #1 Brain [MA:0000168]
HOM M #3 Tibia [MA:0001361]
HOM F #1 Tibia [MA:0001361]
HOM M #3 Epididymis [MA:0000397] 1 0 focally extensive chronic granulomatous epididymitis
HOM F #2 Kidney [MA:0000368]
HOM M #3 Small intestine [MA:0000337]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #3 Brain [MA:0000168]
HOM F #1 Mammary gland [MA:0000145]
HOM F #2 Bone marrow [MA:0000134]
HOM F #1 Skin [MA:0000151]
HOM F #2 Thymus [MA:0000142]
HOM M #3 Liver [MA:0000358]
HOM F #2 Ovary [MA:0000384]
HOM M #3 Skin [MA:0000151]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #3 Pancreas [MA:0000120]
HOM F #1 Liver [MA:0000358]
HOM F #2 Tongue [MA:0000347]
HOM F #2 Lung [MA:0000415]
HOM M #4 Gall bladder [MA:0000356]
HOM F #1 Ear [MA:0000236] 1 0 unilateral Mild unilateral neutrophilic otitis media
HOM M #4 Testis [MA:0000411]
HOM F #2 Gall bladder [MA:0000356]
HOM F #2 Thyroid
HOM M #3 Stomach [MA:0000353]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM F #2 Tibia [MA:0001361]
HOM M #4 Tibia [MA:0001361]
HOM M #3 Ear [MA:0000236] 1 0 unilateral Mild unilateral neutrophilic otitis media
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #1 Stomach [MA:0000353]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #4 Eye [MA:0000261]
HOM F #2 Bone [MA:0001459]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #2 Sternum [MA:0001331]
HOM M #4 Epididymis [MA:0000397]
HOM F #2 Esophagus [MA:0000352]
HOM M #4 Tooth [MA:0000348]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #4 Bone marrow [MA:0000134]

Associated histopathology images

Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental
Hhatl
homozygote
Hhatlem1(IMPC)Mbp
experimental

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