Histopathology data for Aadac

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #2 Tooth [MA:0000348]
HOM M #1 Knee joint [MA:0000471]
HOM M #2 Femur [MA:0001359]
HOM F #4 Trachea [MA:0000441]
HOM M #1 Prostate gland [MA:0000404]
HOM F #4 Bone marrow [MA:0000134]
HOM M #2 Salivary gland [MA:0000346]
HOM F #4 Lymph node [MA:0000139]
HOM F #3 Thyroid
HOM F #3 Gall bladder [MA:0000356]
HOM F #3 Tongue [MA:0000347]
HOM F #4 Spleen [MA:0000141]
HOM F #3 Lung [MA:0000415]
HOM F #4 Skeletal muscle [MA:0003148]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM M #2 Seminal vesicle [MA:0000410]
HOM M #1 Trachea [MA:0000441]
HOM M #1 Ear [MA:0000236]
HOM M #1 Lymph node [MA:0000139]
HOM F #3 Eye [MA:0000261]
HOM F #3 Sternum [MA:0001331]
HOM F #4 Thymus [MA:0000142]
HOM M #2 Esophagus [MA:0000352]
HOM F #4 Gall bladder [MA:0000356]
HOM F #3 Large intestine [MA:0000333]
HOM F #4 Ovary [MA:0000384]
HOM M #1 Bone marrow [MA:0000134]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #4 Kidney [MA:0000368]
HOM F #4 Knee joint [MA:0000471]
HOM M #1 Brain [MA:0000168]
HOM M #2 Bone [MA:0001459]
HOM M #1 Thymus [MA:0000142]
HOM F #3 Spleen [MA:0000141]
HOM F #4 Tongue [MA:0000347]
HOM M #1 Skeletal muscle [MA:0003148]
HOM F #4 Lung [MA:0000415]
HOM F #3 Ovary [MA:0000384]
HOM F #4 Tibia [MA:0001361]
HOM M #2 Thymus [MA:0000142] 2 0 Thymic atrophy
HOM M #2 Spinal cord [MA:0000216]
HOM M #1 Testis [MA:0000411]
HOM F #3 Knee joint [MA:0000471]
HOM F #3 Spinal cord [MA:0000216]
HOM M #2 Ear [MA:0000236]
HOM M #1 Gall bladder [MA:0000356]
HOM M #1 Thyroid
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #4 Eye [MA:0000261]
HOM F #3 Heart [MA:0000072]
HOM M #2 Prostate gland [MA:0000404] 1 0 Periprostatic pleocellular serositis and steatitis with edema
HOM F #3 Nasal cavity [MA:0000284]
HOM M #1 Adrenal gland [MA:0000116]
HOM F #4 Bone [MA:0001459]
HOM F #3 Skeletal muscle [MA:0003148]
HOM M #1 Lung [MA:0000415]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #2 Lymph node [MA:0000139]
HOM M #1 Tongue [MA:0000347]
HOM M #1 Tibia [MA:0001361]
HOM M #2 Knee joint [MA:0000471]
HOM F #3 Thymus [MA:0000142]
HOM F #4 Thyroid
HOM M #2 Trachea [MA:0000441]
HOM M #1 Kidney [MA:0000368]
HOM M #2 Large intestine [MA:0000333]
HOM M #2 Urinary bladder [MA:0000380] 2 0 distention with urine accumulation
HOM M #1 Bone [MA:0001459]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #2 Small intestine [MA:0000337]
HOM F #3 Trachea [MA:0000441]
HOM M #1 Esophagus [MA:0000352]
HOM M #1 Sternum [MA:0001331]
HOM F #4 Heart [MA:0000072]
HOM M #1 Nasal cavity [MA:0000284]
HOM M #2 Brain [MA:0000168]
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM F #3 Bone [MA:0001459]
HOM M #2 Liver [MA:0000358]
HOM F #3 Kidney [MA:0000368]
HOM F #3 Lymph node [MA:0000139]
HOM F #4 Adrenal gland [MA:0000116]
HOM M #2 Skin [MA:0000151]
HOM F #4 Sternum [MA:0001331]
HOM M #2 Skeletal muscle [MA:0003148]
HOM M #2 Pancreas [MA:0000120]
HOM F #4 Esophagus [MA:0000352]
HOM F #3 Femur [MA:0001359]
HOM F #4 Urinary bladder [MA:0000380]
HOM F #3 Skin [MA:0000151]
HOM M #1 Heart [MA:0000072]
HOM F #3 Brain [MA:0000168]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM F #3 Salivary gland [MA:0000346]
HOM M #2 Kidney [MA:0000368] 1 0 Moderate hydronephrosis with tubular ectasia, minimal proteinosis and medullary tubular epithelial necrosis
HOM M #2 Spleen [MA:0000141] 1 0 moderate histiocytosis
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #2 Lung [MA:0000415]
HOM F #4 Pancreas [MA:0000120]
HOM M #1 Stomach [MA:0000353]
HOM M #2 Tongue [MA:0000347]
HOM M #1 Spinal cord [MA:0000216]
HOM F #4 Liver [MA:0000358]
HOM F #3 Tooth [MA:0000348]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #4 Tooth [MA:0000348]
HOM F #3 Mammary gland [MA:0000145]
HOM F #3 Urinary bladder [MA:0000380]
HOM F #4 Spinal cord [MA:0000216]
HOM F #3 Pancreas [MA:0000120]
HOM F #3 Liver [MA:0000358]
HOM M #2 Sternum [MA:0001331]
HOM F #3 Esophagus [MA:0000352]
HOM M #1 Epididymis [MA:0000397]
HOM M #1 Liver [MA:0000358]
HOM M #1 Urinary bladder [MA:0000380]
HOM F #3 Small intestine [MA:0000337]
HOM F #4 Stomach [MA:0000353]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM F #3 Ear [MA:0000236]
HOM F #3 Tibia [MA:0001361]
HOM M #1 Pancreas [MA:0000120]
HOM F #3 Uterus [MA:0000389] 1 0 Hydrometra
HOM M #2 Thyroid
HOM M #1 Eye [MA:0000261]
HOM F #4 Large intestine [MA:0000333]
HOM M #1 Skin [MA:0000151]
HOM M #1 Femur [MA:0001359]
HOM M #1 Sciatic nerve [MA:0001172]
HOM F #4 Mammary gland [MA:0000145]
HOM M #1 Tooth [MA:0000348]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #4 Uterus [MA:0000389]
HOM M #1 Small intestine [MA:0000337]
HOM F #3 Stomach [MA:0000353] 1 0 focally extensive Squamous papilloma with regional epithelial hyperplasia and gastritis
HOM M #2 Heart [MA:0000072]
HOM M #2 Stomach [MA:0000353]
HOM F #4 Sciatic nerve [MA:0001172]
HOM F #4 Brain [MA:0000168]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM F #4 Skin [MA:0000151]
HOM M #1 Large intestine [MA:0000333]
HOM M #1 Spleen [MA:0000141]
HOM F #4 Small intestine [MA:0000337]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM F #3 Bone marrow [MA:0000134]
HOM M #2 Eye [MA:0000261]
HOM M #2 Tibia [MA:0001361]
HOM M #2 Epididymis [MA:0000397]
HOM F #4 Ear [MA:0000236]
HOM M #2 Bone marrow [MA:0000134]
HOM M #1 Salivary gland [MA:0000346]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM F #4 Salivary gland [MA:0000346]
HOM F #3 Sciatic nerve [MA:0001172]
HOM M #2 Gall bladder [MA:0000356]
HOM M #2 Testis [MA:0000411]
HOM F #4 Femur [MA:0001359]

Associated histopathology images

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