International Mouse Phenotyping Resource of Standardised Screens

Ontologies in Procedure: Clinical Chemistry M-G-P_025_001

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Parameter: Glucose M-G-P_025_001_001

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating glucose level	MP:0005559
DECREASED			decreased circulating glucose level	MP:0005560
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			glucose [CHEBI:17234]	increased concentration [PATO:0001162]
DECREASED			glucose [CHEBI:17234]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			glucose [CHEBI:17234]	concentration of [PATO:0000033]

Parameter: Urea M-G-P_025_001_002

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased blood urea nitrogen level	MP:0005565
DECREASED			decreased blood urea nitrogen level	MP:0005566
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			urea [CHEBI:16199]	increased concentration [PATO:0001162]
DECREASED			urea [CHEBI:16199]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			urea [CHEBI:16199]	concentration of [PATO:0000033]

Parameter: Creatinine M-G-P_025_001_003

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating creatinine level	MP:0005553
DECREASED			decreased circulating creatinine level	MP:0005554
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			creatinine [CHEBI:16737]	increased concentration [PATO:0001162]
DECREASED			creatinine [CHEBI:16737]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			creatinine [CHEBI:16737]	concentration of [PATO:0000033]

Parameter: Sodium M-G-P_025_001_004

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating sodium level	MP:0005633
DECREASED			decreased circulating sodium level	MP:0005634
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			sodium [CHEBI:26708]	increased concentration [PATO:0001162]
DECREASED			sodium [CHEBI:26708]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			sodium [CHEBI:26708]	concentration of [PATO:0000033]

Parameter: Potassium M-G-P_025_001_005

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating potassium level	MP:0005627
DECREASED			decreased circulating potassium level	MP:0005628
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			potassium [CHEBI:26216]	increased concentration [PATO:0001162]
DECREASED			potassium [CHEBI:26216]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			potassium [CHEBI:26216]	concentration of [PATO:0000033]

Parameter: Chloride M-G-P_025_001_006

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating chloride level	MP:0003019
DECREASED			decreased circulating chloride level	MP:0003020
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			chloride [CHEBI:17996]	increased concentration [PATO:0001162]
DECREASED			chloride [CHEBI:17996]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			chloride [CHEBI:17996]	concentration of [PATO:0000033]

Parameter: Total protein M-G-P_025_001_007

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating total protein level	MP:0005568
DECREASED			decreased circulating total protein level	MP:0005567
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			protein [CHEBI:36080]	increased concentration [PATO:0001162]
DECREASED			protein [CHEBI:36080]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			protein [CHEBI:36080]	concentration of [PATO:0000033]

Parameter: Albumin M-G-P_025_001_008

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			hyperalbuminemia	MP:0002965
DECREASED			hypoalbuminemia	MP:0005419
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Calcium M-G-P_025_001_009

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			hypercalcemia	MP:0000194
DECREASED			hypocalcemia	MP:0000195
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			calcium [CHEBI:22984]	increased concentration [PATO:0001162]
DECREASED			calcium [CHEBI:22984]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			calcium [CHEBI:22984]	concentration of [PATO:0000033]

Parameter: Phosphorus M-G-P_025_001_010

There are no Basic Ontology Annotation associations for this Parameter

	Option	Increment	Entities	Qualities	Sex
INCREASED			phosphorus [CHEBI:28659]	increased concentration [PATO:0001162]
DECREASED			phosphorus [CHEBI:28659]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			phosphorus [CHEBI:28659]	concentration of [PATO:0000033]

Parameter: Iron M-G-P_025_001_011

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating iron level	MP:0008810
DECREASED			hypoferremia	MP:0004151
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			iron [CHEBI:18248]
DECREASED
ABNORMAL
INFERRED
TRAIT			iron [CHEBI:18248]	concentration of [PATO:0000033]

Parameter: Lactate dehydrogenase M-G-P_025_001_012

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased lactate dehydrogenase level	MP:0002944
DECREASED			decreased lactate dehydrogenase level	MP:0005571
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Aspartate aminotransferase M-G-P_025_001_013

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating aspartate transaminase level	MP:0005343
DECREASED			decreased circulating aspartate transaminase level	MP:0005632
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Alanine aminotransferase M-G-P_025_001_014

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating alanine transaminase level	MP:0002941
DECREASED			decreased circulating alanine transaminase level	MP:0002942
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Alkaline phosphatase M-G-P_025_001_015

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating alkaline phosphatase level	MP:0002968
DECREASED			decreased circulating alkaline phosphatase level	MP:0002966
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Alpha-amylase M-G-P_025_001_016

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating amylase level	MP:0008806
DECREASED			decreased circulating amylase level	MP:0008805
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Total cholesterol M-G-P_025_001_017

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating cholesterol level	MP:0005178
DECREASED			decreased circulating cholesterol level	MP:0005179
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			cholesterol [CHEBI:16113]	increased concentration [PATO:0001162]
DECREASED			cholesterol [CHEBI:16113]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			cholesterol [CHEBI:16113]	concentration of [PATO:0000033]

Parameter: Triglyceride M-G-P_025_001_018

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating triglyceride level	MP:0001552
DECREASED			decreased circulating triglyceride level	MP:0002644
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			triglyceride [CHEBI:17855]	increased concentration [PATO:0001162]
DECREASED			triglyceride [CHEBI:17855]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			triglyceride [CHEBI:17855]	concentration of [PATO:0000033]

Parameter: Free fatty acid M-G-P_025_001_019

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating free fatty acid level	MP:0001554
DECREASED			decreased circulating free fatty acid level	MP:0002702
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			fatty acid [CHEBI:35366]	increased concentration [PATO:0001162]
DECREASED			fatty acid [CHEBI:35366]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			fatty acid [CHEBI:35366]	concentration of [PATO:0000033]

Parameter: Creatine kinase M-G-P_025_001_020

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating creatine kinase level	MP:0010090
DECREASED			decreased circulating fructosamine level	MP:0010088
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Uric acid M-G-P_025_001_021

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased blood uric acid level	MP:0008821
DECREASED			decreased blood uric acid level	MP:0008822
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			uric acid [CHEBI:27226]	increased concentration [PATO:0001162]
DECREASED			uric acid [CHEBI:27226]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			uric acid [CHEBI:27226]	concentration of [PATO:0000033]

Parameter: Total bilirubin M-G-P_025_001_022

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating bilirubin level	MP:0005344
DECREASED			decreased circulating bilirubin level	MP:0005635
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			bilirubin [CHEBI:16990]	increased concentration [PATO:0001162]
DECREASED			bilirubin [CHEBI:16990]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			bilirubin [CHEBI:16990]	concentration of [PATO:0000033]

Parameter: HDL-cholesterol M-G-P_025_001_023

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating HDL cholesterol level	MP:0001556
DECREASED			decreased circulating HDL cholesterol level	MP:0000186
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			high-density lipoprotein cholesterol [CHEBI:47775]	increased concentration [PATO:0001162]
DECREASED			high-density lipoprotein cholesterol [CHEBI:47775]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			high-density lipoprotein cholesterol [CHEBI:47775]	concentration of [PATO:0000033]

Parameter: LDL-cholesterol M-G-P_025_001_024

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating LDL cholesterol level	MP:0000182
DECREASED			decreased circulating LDL cholesterol level	MP:0000183
ABNORMAL
INFERRED

	Option	Increment	Entities	Qualities	Sex
INCREASED			low-density lipoprotein cholesterol [CHEBI:47774]	increased concentration [PATO:0001162]
DECREASED			low-density lipoprotein cholesterol [CHEBI:47774]	decreased concentration [PATO:0001163]
ABNORMAL
INFERRED
TRAIT			low-density lipoprotein cholesterol [CHEBI:47774]	concentration of [PATO:0000033]

Parameter: Ferretin M-G-P_025_001_025

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Transferrin M-G-P_025_001_026

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Magnesium M-G-P_025_001_030

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating magnesium level	MP:0010092
DECREASED			decreased circulating magnesium level	MP:0010093
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Glycerol M-G-P_025_001_029

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating glycerol level	MP:0003443
DECREASED			decreased circulating glycerol level	MP:0003442
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Fructosamine M-G-P_025_001_028

	Option	Increment	Ontology Term	Ontology ID	Sex
INCREASED			increased circulating fructosamine level	MP:0010087
DECREASED			decreased circulating fructosamine level	MP:0010088
ABNORMAL
INFERRED

There are no Entity-Quality Ontology associations for this Parameter

Parameter: C-Reactive protein M-G-P_025_001_027

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Equipment name M-G-P_025_001_801

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Equipment manufacturer M-G-P_025_001_802

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Equipment model M-G-P_025_001_803

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Method of blood collection M-G-P_025_001_804

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: EMPReSSID for blood collection SOP M-G-P_025_001_805

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Date/Time of blood collection M-G-P_025_001_806

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Fasting prior to experiment M-G-P_025_001_807

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Approximate period of fasting M-G-P_025_001_808

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Moved from cage for fasting M-G-P_025_001_809

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Plasma dilution M-G-P_025_001_810

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Sample status M-G-P_025_001_811

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Anaesthesia used for blood collection M-G-P_025_001_812

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Date of measurement M-G-P_025_001_813

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Parameter: Haemolysis status M-G-P_025_001_814

There are no Basic Ontology Annotation associations for this Parameter

There are no Entity-Quality Ontology associations for this Parameter

Copyright © The Medical Research Council 2013