Ontologies in Procedure: Immunophenotyping IMPC_IMM_001

Parameter: Spleen weight IMPC_IMM_001_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Percentage of live gated events in Panel A IMPC_IMM_002_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: T cells (panel A) IMPC_IMM_003_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased T cell number
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: NKT cells (panel A) IMPC_IMM_004_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased NK T cell number
DECREASED decreased NK T cell number
ABNORMAL immune system phenotype

Parameter: NK cells (panel A) IMPC_IMM_005_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased NK cell number
DECREASED decreased NK cell number
ABNORMAL immune system phenotype

Parameter: Others IMPC_IMM_006_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: CD4 T cells IMPC_IMM_007_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-positive, alpha beta T cell number
DECREASED decreased CD4-positive, alpha beta T cell number
ABNORMAL immune system phenotype

Parameter: CD8 T cells IMPC_IMM_008_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD8-positive, alpha-beta T cell number
DECREASED decreased CD8-positive, alpha-beta T cell number
ABNORMAL immune system phenotype

Parameter: DN T cells IMPC_IMM_009_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DP T cells IMPC_IMM_010_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: CD4 NKT cells IMPC_IMM_011_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-positive NK T cell number
DECREASED decreased CD4-positive NK T cell number
ABNORMAL immune system phenotype

Parameter: CD8 NKT cells IMPC_IMM_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: DN NKT cells IMPC_IMM_013_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-negative NK T cell number
DECREASED decreased CD4-negative NK T cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD25+ T cells IMPC_IMM_014_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-positive, CD25-positive, alpha-beta regulatory T cell number
DECREASED decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD25- T cells IMPC_IMM_015_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased T-helper cell number
DECREASED decreased T-helper cell number
ABNORMAL immune system phenotype

Parameter: CD8 CD25+ T cells IMPC_IMM_016_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD8-positive, CD25-positive alpha-beta T cell number
DECREASED decreased CD8-positive, CD25-positive alpha-beta T cell number
ABNORMAL abnormal CD8-positive, CD25-positive alpha-beta T cell number

Parameter: CD8 CD25- T cells IMPC_IMM_017_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: DN CD25+ T cells IMPC_IMM_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DN CD25- T cells IMPC_IMM_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: CD4 CD25+ NKT cells IMPC_IMM_020_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-positive, CD25-positive NK T cell number
DECREASED decreased CD4-positive, CD25-positive NK T cell number
ABNORMAL abnormal CD4-positive, CD25-positive NK T cell number

Parameter: CD4 CD25- NKT cells IMPC_IMM_021_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: CD8 CD25+ NKT cells IMPC_IMM_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: CD8 CD25- NKT cells IMPC_IMM_023_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: DN CD25+ NKT cells IMPC_IMM_024_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD4-negative, CD25-positive NK T cell number
DECREASED decreased CD4-negative, CD25-positive NK T cell number
ABNORMAL abnormal CD4-negative, CD25-positive NK T cell number

Parameter: DN CD25- NKT cells IMPC_IMM_025_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: CD4 CD44+CD62L- T cells IMPC_IMM_028_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased effector memory T-helper cell number
DECREASED decreased effector memory T-helper cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD44+CD62L+ T cells IMPC_IMM_029_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased effector memory T-helper cell number
DECREASED increased effector memory T-helper cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD44-CD62L+ T cells IMPC_IMM_030_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased effector memory T-helper cell number
DECREASED increased effector memory T-helper cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD44-CD62L- T cells IMPC_IMM_031_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: CD8 CD44+CD62L- T cells IMPC_IMM_032_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased effector memory CD8-positive, alpha-beta T cell number
DECREASED decreased effector memory CD8-positive, alpha-beta T cell number
ABNORMAL immune system phenotype

Parameter: CD8 CD44+CD62L+ T cells IMPC_IMM_033_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased effector memory CD8-positive, alpha-beta T cell number
DECREASED increased effector memory CD8-positive, alpha-beta T cell number
ABNORMAL immune system phenotype

Parameter: CD8 CD44-CD62L+ T cells IMPC_IMM_034_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD8-positive, naive alpha-beta T cell number
DECREASED decreased CD8-positive, naive alpha-beta T cell number
ABNORMAL immune system phenotype

Parameter: CD8 CD44-CD62L- T cells IMPC_IMM_035_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DN CD44+CD62L- T cells IMPC_IMM_036_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DN CD44+CD62L+ T cells IMPC_IMM_037_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DN CD44-CD62L+ T cells IMPC_IMM_038_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: DN CD44-CD62L- T cells IMPC_IMM_039_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal T cell compartment
INCREASED abnormal T cell compartment
DECREASED abnormal T cell compartment

Parameter: CD4 CD44+CD62L- NKT cells IMPC_IMM_040_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased memory-marker CD4-positive NK T cell number
DECREASED decreased memory-marker CD4-positive NK T cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD44+CD62L+ NKT cells IMPC_IMM_041_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased memory-marker CD4-positive NK T cell number
DECREASED increased memory-marker CD4-positive NK T cell number
ABNORMAL immune system phenotype

Parameter: CD4 CD44-CD62L+ NKT cells IMPC_IMM_042_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: CD8 CD44+CD62L- NKT cells IMPC_IMM_043_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: CD8 CD44+CD62L+ NKT cells IMPC_IMM_044_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: CD8 CD44-CD62L+ NKT cells IMPC_IMM_045_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: DN CD44+CD62L- NKT cells IMPC_IMM_046_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased memory-marker CD4-negative NK T cell number
DECREASED decreased memory-marker CD4-negative NK T cell number
ABNORMAL immune system phenotype

Parameter: DN CD44+CD62L+ NKT cells IMPC_IMM_047_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased memory-marker CD4-negative NK T cell number
DECREASED increased memory-marker CD4-negative NK T cell number
ABNORMAL immune system phenotype

Parameter: DN CD44-CD62L+ NKT cells IMPC_IMM_048_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal NK T cell physiology
INCREASED abnormal NK T cell physiology
DECREASED abnormal NK T cell physiology

Parameter: Percentage of live gated events in Panel B IMPC_IMM_049_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: Neutrophils IMPC_IMM_050_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased granulocyte number
DECREASED decreased granulocyte number
ABNORMAL immune system phenotype

Parameter: Monocytes IMPC_IMM_051_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased monocyte cell number
DECREASED decreased monocyte cell number
ABNORMAL immune system phenotype

Parameter: Eosinophils IMPC_IMM_052_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased eosinophil cell number
DECREASED decreased eosinophil cell number
ABNORMAL immune system phenotype

Parameter: NK Cells (panel B) IMPC_IMM_053_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased NK cell number
DECREASED decreased NK cell number
ABNORMAL immune system phenotype

Parameter: NK Subsets (Q1) IMPC_IMM_054_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased Ly6C-positive immature NK cell number
DECREASED decreased Ly6C-positive immature NK cell number
ABNORMAL immune system phenotype

Parameter: NK Subsets (Q2) IMPC_IMM_055_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased Ly6C-positive mature NK cell number
DECREASED decreased Ly6C-positive mature NK cell number
ABNORMAL immune system phenotype

Parameter: NK Subsets (Q3) IMPC_IMM_056_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased Ly6C-positive immature NK cell number
DECREASED increased Ly6C-positive immature NK cell number
ABNORMAL immune system phenotype

Parameter: NK Subsets (Q4) IMPC_IMM_057_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased Ly6C-positive mature NK cell number
DECREASED increased Ly6C-positive mature NK cell number
ABNORMAL immune system phenotype

Parameter: NKT Cells (panel B) IMPC_IMM_058_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased NK T cell number
DECREASED decreased NK T cell number
ABNORMAL immune system phenotype

Parameter: NKT Subsets (Q1) IMPC_IMM_059_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased Ly6C-positive NK T cell number
DECREASED decreased Ly6C-positive NK T cell number
ABNORMAL immune system phenotype

Parameter: NKT Subsets (Q3) IMPC_IMM_060_001

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased Ly6C-positive NK T cell number
DECREASED increased Ly6C-positive NK T cell number
ABNORMAL immune system phenotype

Parameter: T Cells (panel B) IMPC_IMM_061_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased T cell number
DECREASED decreased T cell number
ABNORMAL immune system phenotype

Parameter: T Subset IMPC_IMM_062_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD5-positive Ly6C-positive T cell number
DECREASED decreased CD5-positive Ly6C-positive T cell number
ABNORMAL immune system phenotype

Parameter: B Cells IMPC_IMM_063_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased B cell number
DECREASED decreased B cell number
ABNORMAL immune system phenotype

Parameter: B1B Cells IMPC_IMM_064_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased B-1a cell number
DECREASED decreased B-1a cell number
ABNORMAL immune system phenotype

Parameter: B2B Cells IMPC_IMM_065_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased B-2 B cell number
DECREASED decreased B-2 B cell number
ABNORMAL immune system phenotype

Parameter: Follicular B Cells IMPC_IMM_066_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased follicular B cell number
DECREASED decreased follicular B cell number
ABNORMAL immune system phenotype

Parameter: Follicular B Cells (CD21/35+) IMPC_IMM_067_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased follicular B cell number
DECREASED decreased follicular B cell number
ABNORMAL immune system phenotype

Parameter: Transitional B Cells IMPC_IMM_068_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased transitional stage B cell number
DECREASED decreased transitional stage B cell number
ABNORMAL immune system phenotype

Parameter: Transitional B Cells (CD21/35 low) IMPC_IMM_069_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased transitional stage B cell number
DECREASED decreased transitional stage B cell number
ABNORMAL immune system phenotype

Parameter: MZB IMPC_IMM_070_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased marginal zone B cell number
DECREASED decreased marginal zone B cell number
ABNORMAL immune system phenotype

Parameter: MZB (CD21/35 high) IMPC_IMM_071_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased marginal zone B cell number
DECREASED decreased marginal zone B cell number
ABNORMAL immune system phenotype

Parameter: cDCs IMPC_IMM_072_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased dendritic cell number
DECREASED decreased dendritic cell number
ABNORMAL immune system phenotype

Parameter: cDCs CD11b Type IMPC_IMM_073_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased CD11b-high dendritic cell number
DECREASED decreased CD11b-high dendritic cell number
ABNORMAL immune system phenotype

Parameter: pDCs IMPC_IMM_074_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased plasmacytoid dendritic cell number
DECREASED decreased plasmacytoid dendritic cell number
ABNORMAL immune system phenotype

Parameter: RP Macrophage (F4/80+) IMPC_IMM_075_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased macrophage cell number
DECREASED decreased macrophage cell number
ABNORMAL immune system phenotype

Parameter: RP Macrophage (CD19- CD11c-) IMPC_IMM_076_001

Option Increment Ontology Term Ontology ID Sex
INCREASED increased macrophage cell number
DECREASED decreased macrophage cell number
ABNORMAL immune system phenotype

Parameter: Equipment name IMPC_IMM_077_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Equipment manufacturer IMPC_IMM_078_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Equipment model IMPC_IMM_079_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: CS&T Bead lot IMPC_IMM_080_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Anesthesia IMPC_IMM_081_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell digestion IMPC_IMM_082_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell digestion agent IMPC_IMM_083_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell digestion agent manufacturer IMPC_IMM_084_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell digestion agent catalog number IMPC_IMM_085_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell counting IMPC_IMM_086_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell counting equipment manufacturer IMPC_IMM_087_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell counting equipment model IMPC_IMM_088_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell counting equipment name IMPC_IMM_089_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell lysis buffer manufacturer IMPC_IMM_090_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell lysis buffer catalog number IMPC_IMM_091_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Date and time of sacrifice IMPC_IMM_092_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Date and time of sample preparation IMPC_IMM_093_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Sample storage temperature until analysis (in Celsius) IMPC_IMM_094_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: FCS repository reference (URL/ID) IMPC_IMM_095_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Total number of acquired events in Panel A IMPC_IMM_026_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: Total number of acquired events in Panel B IMPC_IMM_027_001

Option Increment Ontology Term Ontology ID Sex
INCREASED immune system phenotype
DECREASED immune system phenotype
ABNORMAL immune system phenotype

Parameter: Balanced salt solution type IMPC_IMM_096_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Balanced salt solution manufacturer IMPC_IMM_097_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Balanced salt solution catalog number IMPC_IMM_098_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: RPMI manufacturer IMPC_IMM_099_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: RPMI catalog number IMPC_IMM_100_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: DNAse I manufacturer IMPC_IMM_101_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: DNAse I catalog number IMPC_IMM_102_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Dead cell exclusion dye IMPC_IMM_103_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Dead cell exclusion dye manufacturer IMPC_IMM_104_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Dead cell exclusion dye catalog number IMPC_IMM_105_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Cell digestion temperature (in Celsius) IMPC_IMM_106_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Panel A FCS file(s) IMPC_IMM_107_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Panel B FCS file(s) IMPC_IMM_108_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Automated analysis IMPC_IMM_109_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Collection buffer manufacturer IMPC_IMM_110_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Collection buffer catalog number number IMPC_IMM_111_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: FACS buffer manufacturer IMPC_IMM_112_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: FACS buffer catalog number IMPC_IMM_113_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Enzyme buffer manufacturer IMPC_IMM_114_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Enzyme buffer catalog number IMPC_IMM_115_001

There are no Basic Ontology Annotation associations for this Parameter

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