IMPC Gene variants with increased NK T cell number
Total number of significant genotype-phenotype associations: 46
Gene / Allele | Zygosity | Sex | Life Stage | Phenotype | Parameter | Phenotyping Center |
P Value |
---|---|---|---|---|---|---|---|
Arhgef1 Arhgef1tm1a(EUCOMM)Wtsi |
HOM | Early adult | increased Ly6C-positive NK T cell number | Ly6C+ NKT cells - % of NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Arpc1b Arpc1btm1a(EUCOMM)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Effector CD4- NKT cells - % of CD4- NKT cells Mesenteric Lymph Node Immunophenotyping |
WTSI 3i |
0.00 | |
Bach2 Bach2tm1a(EUCOMM)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Effector CD4- NKT cells - % of CD4- NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Bach2 Bach2tm1a(EUCOMM)Wtsi |
HOM | Early adult | increased KLRG1-positive CD4-negative NK T cell number | KLRG1+ CD4- NKT cells - % of CD45+ Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Cog6 Cog6tm1a(EUCOMM)Wtsi |
HOM | Early adult | increased CD4-negative NK T cell number | Total CD4- NKT cells - % of NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Cxcr2 Cxcr2tm1a(EUCOMM)Wtsi |
HOM | Early adult | increased memory-marker CD4-positive NK T cell number | Effector CD4+ NKT cells - % of CD45+ Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Dph6 Dph6tm1a(KOMP)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Resting CD4- NKT cells - % of CD45+ Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Gimap6 Gimap6tm1a(KOMP)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Resting CD4- NKT cells - % of CD45+ Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Gmds Gmdstm1a(KOMP)Wtsi |
HOM | Early adult | increased Ly6C-positive NK T cell number | Ly6C+ NKT cells - % of lymphocytes Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Gmds Gmdstm1a(KOMP)Wtsi |
HOM | Early adult | increased CD4-negative NK T cell number | Total CD4- NKT cells - % of NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Gmds Gmdstm1a(KOMP)Wtsi |
HOM | Early adult | increased NK T cell number | NKT cell number Whole blood peripheral blood leukocyte immunophenotyping |
WTSI 3i |
0.00 | |
Pepd Pepdtm1a(KOMP)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Resting CD4- NKT cells - % of CD45+ Mesenteric Lymph Node Immunophenotyping |
WTSI 3i |
0.00 | |
Prkab1 Prkab1tm1b(KOMP)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | Effector CD4- NKT cells - % of CD45+ Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Sik3 Sik3tm1a(EUCOMM)Hmgu |
HOM | Early adult | increased KLRG1-positive CD4-negative NK T cell number | KLRG1+ CD4- NKT cells - % of CD45+ Mesenteric Lymph Node Immunophenotyping |
WTSI 3i |
0.00 | |
Sik3 Sik3tm1a(EUCOMM)Hmgu |
HOM | Early adult | increased Ly6C-positive NK T cell number | Ly6C+ NKT cells - % of NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Sik3 Sik3tm1a(EUCOMM)Hmgu |
HOM | Early adult | increased CD4-negative NK T cell number | Total CD4- NKT cells - % of NKT cells Spleen Immunophenotyping |
WTSI 3i |
0.00 | |
Spred1 Spred1em1(IMPC)Ccpcz |
HOM | Early adult | increased CD4-positive NK T cell number | CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
1.46×10-12 | |
Spred1 Spred1em1(IMPC)Ccpcz |
HOM | Early adult | increased memory-marker CD4-positive NK T cell number | Effector CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
1.85×10-12 | |
Bach2 Bach2tm1b(EUCOMM)Wtsi |
HOM | Early adult | increased memory-marker CD4-negative NK T cell number | DN CD44+CD62L+ NKT cells Immunophenotyping |
HMGU IMPC |
7.36×10-11 | |
Spred1 Spred1em1(IMPC)Ccpcz |
HOM | Early adult | increased NK T cell number | NKT cells (panel A) - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
5.95×10-10 | |
Bach2 Bach2tm1b(EUCOMM)Wtsi |
HOM | Early adult | increased NK T cell number | NKT Cells (panel B) Immunophenotyping |
HMGU IMPC |
1.79×10-08 | |
Nub1 Nub1tm1b(EUCOMM)Hmgu |
HOM | Early adult | increased Ly6C-positive NK T cell number | NKT Subsets (Q3) Immunophenotyping |
CCP-IMG IMPC |
7.09×10-07 | |
Rhobtb1 Rhobtb1em2(IMPC)Ccpcz |
HOM | Early adult | increased Ly6C-positive NK T cell number | NKT Subsets (Q3) Immunophenotyping |
CCP-IMG IMPC |
1.09×10-06 | |
Psmb11 Psmb11em1(IMPC)Ccpcz |
HOM | Early adult | increased CD4-positive NK T cell number | CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
1.14×10-06 | |
Psmb11 Psmb11em1(IMPC)Ccpcz |
HOM | Early adult | increased memory-marker CD4-positive NK T cell number | Effector CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
1.16×10-06 | |
Ubd Ubdtm1b(EUCOMM)Wtsi |
HOM | Early adult | increased CD4-positive, CD25-positive NK T cell number | CD4 CD25+ NKT cells Immunophenotyping |
CCP-IMG IMPC |
1.37×10-06 | |
Bahd1 Bahd1tm2b(KOMP)Wtsi |
HET | Early adult | increased CD4-negative NK T cell number | DN NKT cells Immunophenotyping |
ICS IMPC |
1.63×10-06 | |
Psmb11 Psmb11em1(IMPC)Ccpcz |
HOM | Early adult | increased NK T cell number | NKT cells (panel A) - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
2.65×10-06 | |
Stk26 Stk26tm1b(EUCOMM)Hmgu |
HEM | Early adult | increased NK T cell number | NKT Cells (panel B) Immunophenotyping |
CCP-IMG IMPC |
2.75×10-06 | |
Pax5 Pax5tm1b(EUCOMM)Wtsi |
HET | Early adult | increased memory-marker CD4-positive NK T cell number | CD4 CD44+CD62L- NKT cells Immunophenotyping |
HMGU IMPC |
4.63×10-06 | |
Bahd1 Bahd1tm2b(KOMP)Wtsi |
HET | Early adult | increased memory-marker CD4-negative NK T cell number | DN CD44+CD62L- NKT cells Immunophenotyping |
ICS IMPC |
6.66×10-06 | |
Pax5 Pax5tm1b(EUCOMM)Wtsi |
HET | Early adult | increased CD4-positive NK T cell number | CD4 NKT cells Immunophenotyping |
HMGU IMPC |
1.30×10-05 | |
Bahd1 Bahd1tm2b(KOMP)Wtsi |
HET | Early adult | increased NK T cell number | NKT Cells (panel B) Immunophenotyping |
ICS IMPC |
1.38×10-05 | |
Tppp3 Tppp3em1(IMPC)Ccpcz |
HET | Early adult | increased memory-marker CD4-positive NK T cell number | Effector CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
3.05×10-05 | |
Tppp3 Tppp3em1(IMPC)Ccpcz |
HET | Early adult | increased CD4-positive NK T cell number | CD4+ NKT cells - % of live leukocytes (Panel A) Immunophenotyping |
CCP-IMG IMPC |
4.27×10-05 | |
Lgr5 Lgr5em1(IMPC)Kmpc |
HET | Early adult | increased CD4-negative, CD25-positive NK T cell number | DN CD25+ NKT cells Immunophenotyping |
KMPC IMPC |
5.38×10-05 | |
Asb2 Asb2tm2b(KOMP)Wtsi |
HET | Early adult | increased Ly6C-positive NK T cell number | NKT Subsets (Q1) Immunophenotyping |
KMPC IMPC |
6.41×10-05 | |
Pip4p1 Pip4p1em1(IMPC)Ccpcz |
HOM | Early adult | increased CD4-negative, CD25-positive NK T cell number | DN CD25+ NKT cells Immunophenotyping |
CCP-IMG IMPC |
8.23×10-05 |