Phenotype: abnormal spinal cord morphology

Definition any structural anomaly of the cylindrical tissue of the vertebral canal that extends from the medulla oblongata to the conus medullaris

Synonyms
  • spinal cord dysplasia
  • spinal cord dysplasia
  • spinal cord abnormalities
  • spinal cord abnormalities
Related
Synonyms
  • Abnormal motor neuron morphology
  • Abnormal motor neuron morphology
  • Abnormal shape of motor neuron
  • Abnormal shape of motor neuron
  • Narrow spinal canal
  • Spinal canal stenosis
  • Spinal stenosis
  • abnormal LMC morphology
  • abnormal MMC morphology
  • abnormal anteriolateral column morphology
  • abnormal anterior column morphology
  • abnormal anterior funiculus morphology
  • abnormal anterior grey commissure
  • abnormal anterior horn morphology
  • abnormal anterior white commissure
  • abnormal dorsal funiculus morphology
  • abnormal dorsal horn morphology
  • abnormal lateral funiculus morphology
  • abnormal motoneuron morphology
  • abnormal motor neuron morphology
  • abnormal motor neurons
  • abnormal posterior column morphology
  • abnormal posterior cornu morphology
  • abnormal posterior funiculus morphology
  • abnormal posterior gray horn morphology
  • abnormal posterior grey commissure
  • abnormal posterior horn morphology
  • abnormal spinal cord alba morphology
  • abnormal spinal cord anterior commissure
  • abnormal spinal cord anterior commissure morphology
  • abnormal spinal cord central canal morphology
  • abnormal spinal cord commissure morphology
  • abnormal spinal cord dorsal column morphology
  • abnormal spinal cord dorsal horn morphology
  • abnormal spinal cord ependymal layer morphology
  • abnormal spinal cord gray columns morphology
  • abnormal spinal cord gray commissure morphology
  • abnormal spinal cord gray matter morphology
  • abnormal spinal cord grey columns morphology
  • abnormal spinal cord grey commissure morphology
  • abnormal spinal cord grey matter morphology
  • abnormal spinal cord interneuron morphology
  • abnormal spinal cord lateral column morphology
  • abnormal spinal cord lateral motor column morphology
  • abnormal spinal cord mantle layer morphology
  • abnormal spinal cord medial motor column morphology
  • abnormal spinal cord motile cilia morphology
  • abnormal spinal cord motile cilium morphology
  • abnormal spinal cord motor column morphology
  • abnormal spinal cord posterior column morphology
  • abnormal spinal cord ventral column morphology
  • abnormal spinal cord ventral commissure morphology
  • abnormal spinal cord ventral horn morphology
  • abnormal spinal cord ventricular layer morphology
  • abnormal spinal cord white matter morphology
  • abnormal spinal cord white substance morphology
  • abnormal ventral funiculus morphology
  • abnormal ventral horn morphology
  • abnormal ventral spinal commissure morphology
  • abnormal ventral white column morphology
  • abnormal white commissure
  • decreased spinal cord size
  • diastematomyelia
  • diastomyelia
  • diplomyelia
  • enlarged spinal cord size
  • hydromyelia
  • hydrorrhachis
  • increased spinal cord size
  • motor neuron abnormalities
  • motor neuron dysplasia
  • myelosyringosis
  • reduced spinal cord size
  • small spinal cord
  • spinal cord cyst
  • spinal cord degeneration
  • spinal cord syrinx
  • syringomyelia
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Phenotype associations stats

0.39% of tested genes with null mutations on a B6N genetic background have a phenotype association to abnormal spinal cord morphology (9/2299)

0.26% females (6/2287) 0.18% males (4/2283)

Gene variants with abnormal spinal cord morphology

Total number of significant genotype-phenotype associations: 11

Gene / Allele Zygosity Sex Life Stage Phenotype Procedure | Parameter Phenotyping Center | Source P Value Data
Arih2
Arih2tm1.1(KOMP)Vlcg
HET Female embryonic day 9.5 abnormal spinal cord morphology Gross Morphology Embryo E9.5 | Spinal cord TCP | IMPC 0.0
Arih2
Arih2tm1.1(KOMP)Vlcg
HOM Female Male embryonic day 9.5 abnormal spinal cord morphology Gross Morphology Embryo E9.5 | Spinal cord TCP | IMPC 0.0
Atr
Atrtm1b(KOMP)Wtsi
HET Female postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
Dnajb12
Dnajb12tm1.1(KOMP)Vlcg
HET Male postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
Elfn1
Elfn1tm1.1(KOMP)Vlcg
HOM Female postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord UC Davis | IMPC 0.0
Gipc3
Gipc3tm1b(KOMP)Wtsi
HOM Female postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
H1fx
H1fxtm1.1(KOMP)Vlcg
HET Female postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
Rgp1
Rgp1tm1.1(KOMP)Vlcg
HET Female postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
Stk16
Stk16tm1.1(KOMP)Vlcg
HOM Male postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0
Wars2
Wars2tm1.1(KOMP)Vlcg
HET Male postnatal abnormal spinal cord morphology Gross Pathology and Tissue Collection | Spinal cord JAX | IMPC 0.0

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