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Phenotype: abnormal cecum morphology

Definition
any structural anomaly of the large sac at the ileum and large intestine junction
Synonyms
abnormal caecum morphology,  cecum dysplasia
Significant gene associations The way we measure Phenotype stats
0%
of tested genes
0
significant genes
0
tested genes

IMPC Gene variants with abnormal cecum morphology

Total number of significant genotype-phenotype associations: 90

Gene / Allele Zygosity Sex Life Stage Phenotype Parameter Phenotyping
Center		 P Value
Afdn
Afdnem1(IMPC)Mbp 		HET Late adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ap2s1
Ap2s1em1(IMPC)Tcp 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ap2s1
Ap2s1em1(IMPC)Tcp 		HET Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Aspscr1
Aspscr1em1(IMPC)Tcp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 TCP
IMPC		 0.00
C1qtnf1
C1qtnf1em1(IMPC)Mbp 		HOM Late adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
C1qtnf1
C1qtnf1em1(IMPC)Mbp 		HOM Late adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Camkv
Camkvem1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Camkv
Camkvem1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Cartpt
Cartptem1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Casp2
Casp2em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Casp2
Casp2em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Chsy1
Chsy1em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Chsy1
Chsy1em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Cnr2
Cnr2em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Cnr2
Cnr2em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Cpne7
Cpne7em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Crbn
Crbntm1b(KOMP)Wtsi 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ctrc
Ctrctm1b(EUCOMM)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Efemp1
Efemp1tm1.1(KOMP)Vlcg 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Eppin
Eppinem1(IMPC)Mbp 		HOM Late adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Eppin
Eppinem1(IMPC)Mbp 		HOM Late adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Evc2
Evc2em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Fads6
Fads6tm1b(EUCOMM)Wtsi 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Gm14496
Gm14496em2(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Gopc
Gopctm1e.1(EUCOMM)Wtsi 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Gopc
Gopctm1e.1(EUCOMM)Wtsi 		HET Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ica1
Ica1tm1b(EUCOMM)Wtsi 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ica1
Ica1tm1b(EUCOMM)Wtsi 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ica1l
Ica1ltm1b(EUCOMM)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Irag1
Irag1em1(IMPC)Ccpcz 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 CCP-IMG
IMPC		 0.00
Irag1
Irag1em1(IMPC)Ccpcz 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 CCP-IMG
IMPC		 0.00
Kbtbd12
Kbtbd12em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Kbtbd12
Kbtbd12em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Kcnn4
Kcnn4em1(IMPC)Ccpcz 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 CCP-IMG
IMPC		 0.00
Klrb1
Klrb1tm1b(EUCOMM)Wtsi 		HOM Late adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Man2a1
Man2a1em1(IMPC)Hmgu 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Mgst2
Mgst2em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Mgst2
Mgst2em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Mllt10
Mllt10em1(IMPC)Mbp 		HET Late adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Mllt10
Mllt10em1(IMPC)Mbp 		HET Late adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Myoz1
Myoz1tm1b(EUCOMM)Hmgu 		HOM Late adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Nfil3
Nfil3tm1.1(KOMP)Vlcg 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Nup35
Nup35tm1b(EUCOMM)Wtsi 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Or1e1c
Or1e1cem1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Or1e1c
Or1e1cem1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Or1e32
Or1e32em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Or1e32
Or1e32em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Pan3
Pan3em1(IMPC)Tcp 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 TCP
IMPC		 0.00
Pramel12
Pramel12em1(IMPC)Mbp 		HOM Late adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Prox2
Prox2em1(IMPC)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Ptgs1
Ptgs1em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ptgs1
Ptgs1em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Scmh1
Scmh1tm1e.1(EUCOMM)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Sema6c
Sema6cem1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Sema6c
Sema6cem1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Shfl
Shfltm1.1(KOMP)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Slc22a4
Slc22a4tm1.1(KOMP)Vlcg 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Slc29a3
Slc29a3em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Slc29a3
Slc29a3em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Slc49a4
Slc49a4em1(IMPC)Mbp 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Slc49a4
Slc49a4em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Srpk3
Srpk3tm1b(KOMP)Wtsi 		HEM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tbl1xr1
Tbl1xr1tm1b(EUCOMM)Hmgu 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Thg1l
Thg1ltm1b(EUCOMM)Wtsi 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Tlr4
Tlr4tm1.1(KOMP)Vlcg 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tlr4
Tlr4tm1.1(KOMP)Vlcg 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tmcc2
Tmcc2em1(IMPC)Mbp 		HET Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tmcc2
Tmcc2em1(IMPC)Mbp 		HET Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tmem248
Tmem248tm1.1(KOMP)Vlcg 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Tmem248
Tmem248tm1.1(KOMP)Vlcg 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Ubac2
Ubac2tm1e.1(EUCOMM)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Wnt10b
Wnt10btm1e.1(KOMP)Wtsi 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Wrnip1
Wrnip1tm1b(EUCOMM)Wtsi 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00
Zfp398
Zfp398em1(IMPC)Mbp 		HOM Early adult small cecum Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Zfp398
Zfp398em1(IMPC)Mbp 		HOM Early adult abnormal cecum morphology Large intestine
Gross Pathology and Tissue Collection		 UC Davis
IMPC		 0.00
Zfp61
Zfp61tm1b(EUCOMM)Hmgu 		HOM Early adult enlarged cecum Large intestine
Gross Pathology and Tissue Collection		 HMGU
IMPC		 0.00

Download data as:   TSV   XLS

 The way we measure

 Phenotype associations stats

103.92% of tested genes with null mutations on a B6N genetic background have a phenotype association to abnormal cecum morphology (53/51)

100.00% females (26/26) 105.71% males (37/35)

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