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Phenotype: cleft palate

Definition
congenital fissure of the tissues normally uniting to form the palate
Synonyms
palatoschisis
Significant gene associations The way we measure Phenotype stats
0%
of tested genes
0
significant genes
0
tested genes

IMPC Gene variants with cleft palate

Total number of significant genotype-phenotype associations: 78

Gene / Allele Zygosity Sex Life Stage Phenotype Parameter Phenotyping
Center		 P Value
Adamts6
Adamts6em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Amt
Amtem1(IMPC)Tcp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 TCP
IMPC		 0.00
Ap2b1
Ap2b1em1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Cdk20
Cdk20em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Col11a1
Col11a1em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Col27a1
Col27a1em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Cramp1
Cramp1em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Dnmt3b
Dnmt3bem1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Esrp1
Esrp1em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Fgf9
Fgf9tm1b(KOMP)Wtsi 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Fgfr1op2
Fgfr1op2em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Focad
Focadem1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Fuz
Fuzem1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Gdf11
Gdf11tm2b(EUCOMM)Hmgu 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Hacd1
Hacd1em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Hesx1
Hesx1em1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Kcnj13
Kcnj13tm1b(KOMP)Wtsi 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Kdelr2
Kdelr2em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Lgr5
Lgr5em1(IMPC)Kmpc 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 KMPC
IMPC		 0.00
Msx1
Msx1tm1b(KOMP)Wtsi 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Nbea
Nbeaem1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Nxn
Nxnem1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Nxn
Nxntm1b(EUCOMM)Wtsi 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 JAX
IMPC		 0.00
Nxn
Nxntm1b(EUCOMM)Wtsi 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Pax6
Pax6em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Pcgf3
Pcgf3em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Pcsk5
Pcsk5tm1b(KOMP)Mbp 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Pfdn1
Pfdn1em1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Prtg
Prtgem1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Ptov1
Ptov1em1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Rab34
Rab34tm1b(EUCOMM)Hmgu 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 JAX
IMPC		 0.00
Rab34
Rab34tm1b(EUCOMM)Hmgu 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Rgl1
Rgl1em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Ror2
Ror2em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Ryk
Rykem1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Slc35d1
Slc35d1tm2b(EUCOMM)Hmgu 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Slmap
Slmapem1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Snx3
Snx3tm1.1(KOMP)Vlcg 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 JAX
IMPC		 0.00
Strada
Stradaem1(IMPC)Bay 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 BCM
IMPC		 0.00
Tbc1d32
Tbc1d32em1(IMPC)J 		HOM E18.5 cleft palate Cleft palate
Gross Morphology Embryo E18.5		 JAX
IMPC		 0.00
Top2b
Top2bem1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Vangl2
Vangl2em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00
Wdfy3
Wdfy3em1(IMPC)Mbp 		HOM E15.5 cleft palate Cleft Palate
Gross Morphology Embryo E14.5-E15.5		 UC Davis
IMPC		 0.00

Download data as:   TSV   XLS

 The way we measure

Procedure
Gross Morphology Embryo E14.5-E15.5
Gross Morphology Embryo E18.5

 Phenotype associations stats

6.03% of tested genes with null mutations on a B6N genetic background have a phenotype association to cleft palate (40/663)

6.36% females (37/582) 6.06% males (35/578)

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