Gene: Smarcd2

Order

Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Synonyms Baf60b

Status ES CellsMice
tm1
Mice
tm1.1
phenotype data available

Links MGI:1933621    Ensembl Gene    Ensembl Orthologs    My Genes   

Viability Homozygous - Subviable

Phenotype associations for Smarcd2

Significant     Not Significant     Not tested    
All Phenotypes Summary

Based on automated MP annotations supported by experiments on knockout mouse models. Click on icons to go to all Smarcd2 data for that phenotype.

Embryo Data: 3D Embryo Imaging
Significant Phenotypes

System Phenotype Allele Zyg Sex Life Stage P Value Data
abnormal embryo size Smarcd2tm1.1(KOMP)Vlcg HET Female Male embryonic day 15.5 0.0
edema Smarcd2tm1.1(KOMP)Vlcg HET Female Male embryonic day 15.5 0.0
edema Smarcd2tm1.1(KOMP)Vlcg HOM Female Male embryonic day 15.5 0.0
preweaning lethality, incomplete penetrance Smarcd2tm1.1(KOMP)Vlcg HOM Female Male n/a 0.0
decreased circulating alanine transaminase level Smarcd2tm1.1(KOMP)Vlcg HET Female Male postnatal 3.76E-7

Download data as: TSV XLS



Expression

IMPC lacZ Expression Data
Show expression table

 Expression    No Expression    No Tissue Available    Ambiguous  

Show Wildtype Expression
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 4 No (2/415) (4/4)
Aorta 4 No
Blood 2 No
Bone marrow 2 No
Brain 4 No (2/4)
Brainstem 4 No (2/4)
Brown adipose tissue 4 No (2/4)
Cartilage tissue 4 No
Cecum 2 No (12/383)
Cerebellum 4 No (3/4)
Cerebral cortex 4 No (1/4)
Chest bone 2 No
Colon 2 No (12/127) (2/2)
Diaphragm 2 No
Duodenum 2 No (2/127) (1/2)
Epididymis 3 No (18/134) (2/3)
Esophagus 4 No (7/415) (2/4)
Eye 4 No (3/4)
Gall bladder 2 No
Gonadal fat pad 2 No
Harderian gland 2 No (2/2)
Heart 4 No (2/4)
Hindlimb 2 No
Hippocampus 4 No (1/4)
Hypothalamus 4 No (2/4)
Ileum 2 No (14/127) (2/2)
Jejunum 2 No (6/127)
Kidney 4 No (18/584) (4/4)
Large intestine 4 No (10/584) (1/4)
Liver 4 No (3/4)
Lower urinary tract 4 No
Lung 4 No (1/4)
Lymph node 4 No (2/4)
Mammary gland 4 No (1/4)
Mesenteric lymph node 2 No
Mesenteric adipose tissue 2 No
Midbrain 2 No (2/2)
Olfactory lobe 4 No (2/4)
Ovary 4 No (1/584) (1/4)
Oviduct 4 No (1/4)
Pancreas 4 No (5/584) (2/4)
Parathyroid gland 2 No (1/2)
Parotid gland 2 No (2/2)
Penis 2 No (1/2)
Peripheral nervous system 4 No
Peyer's patch 4 No
Pituitary gland 4 No (2/4)
Prostate gland 4 No (12/584) (2/4)
Quadriceps 2 No
Sciatic nerve 2 No
Skeletal muscle 4 No (2/4)
Skin 4 No (3/4)
Small intestine 4 No (9/584) (2/4)
Spinal cord 4 No
Spleen 4 No (2/584) (1/4)
Stomach 4 No (12/584) (4/4)
Stomach pyloric region 2 No
Striatum 4 No
Sublingual gland 2 No (2/2)
Submandibular gland 2 No (2/132) (1/2)
Testis 4 No (2/584) (1/4)
Thymus 4 No (4/4)
Thyroid gland 4 No (15/584) (3/4)
Tongue 2 No (5/127) (2/2)
Trachea 4 No (4/4)
Trigeminal V nerve 2 No (2/2)
Urinary bladder 2 No (2/2)
Uterus 4 No (2/4)
Vagina 2 No (1/2)
Vas deferens 2 No (15/388) (1/2)
Vascular system 4 No
Vesicular gland 2 No (1/2)
White adipose tissue 4 No
Expression in Anatomogram

Tissues/organs lacZ+ expression

    endocrine system
    respiratory system
    digestive system
    cardiovascular system
    set of connective tissues
    reproductive system musculoskeletal system
    adipose tissue
    trunk
    postnatal mouse
    nervous system
    sensory organ
    immune system exocrine system
    integumental system
    urinary system
No expression image was found for this adult tab

 Expression    No Expression    No Tissue Available    Ambiguous  

Anatomy #HET Specimens WT Expr Mutant Expr Images
Axial skeleton 2 (1/51)
Brain 5 (6/485) (2/8)
Central nervous system ganglion 2 (1/51) (2/2)
Ear 5 (1/485)
Embryo 5 (1/485) (2/8)
Eye 5 (1/485) (2/8)
Foot 5 (1/485)
Forebrain 5 (1/485) (2/8)
Forelimb 5 (1/485)
Gut 2 (1/50) (2/2)
Hand 5 (1/485)
Head 5 (5/485)
Heart 5 (1/485) (2/8)
Hindbrain 5 (6/485) (2/8)
Hindlimb 5 (1/485)
Liver 5 (1/485) (2/8)
Lung 5 (1/485)
Mandibular process 5 (1/485)
Maxillary process 5 (1/485)
Midbrain 5 (1/485) (2/8)
Nose 2 (1/51)
Oral cavity 5 (1/485)
2 (7/25) (2/2)
Skeleton 2 (1/51)
Skin 5 (1/485) (2/8)
Spinal cord 2 (1/50) (2/2)
Tail 5 (1/485)
Tail somite 5 (1/485) (2/8)
Trachea 2 (1/50)
Urinary system 2 (1/50) (2/2)


Associated Images

Associated Images
  • X-ray: XRay Images Lateral Orientation
    10 Images
  • X-ray: XRay Images Dorso Ventral
    10 Images
  • Embryo LacZ: LacZ images wholemount
    24 Images
  • Adult LacZ: LacZ Images Section
    18 Images

Order Mouse and ES Cells

Targeting Detail Product Ordering
MGI Allele Allele Type Type Map Seq Vector ES Cell Mouse Tissue Enquiry
Smarcd2tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette)
Vector
Gene
Smarcd2tm1.1(KOMP)Vlcg Reporter-tagged deletion allele (post Cre, with no selection cassette)
Vector
Gene
Fixed Tissue
Smarcd2tm437304(L1L2_Bact_P)
Vector
Gene
Smarcd2tm437304(L1L2_GT0_LF2A_LacZ_BetactP_neo)
Vector
Gene
Smarcd2tm96137(L1L2_Bact_P)
Vector
Gene