All data for Ydjc

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Allele Center Procedure / Parameter Zygosity Mutants Statistical
Method
P Value Status Graph
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Tail - thickness HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw footpad size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector gd cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair distribution - back HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Bulging eye HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Bulging eye HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / External genitalia morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / B cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / NKT cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pre-pro B cells (Hardy fraction A) - % of B220+ HOM 4f:4m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Iris/Pupil HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Iris/Pupil HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Snout morphology HOM 7f:7m Fisher Exact Test framework 0.22596 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Mean cell hemoglobin concentration HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.043719 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Mean cell hemoglobin concentration HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.051139 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Kyphosis HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Lumbar processes HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Incisors morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total B cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Corneal deposits HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Fibula HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 6kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 6kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / 6kHz-evoked ABR Threshold HOM 0f:4m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Shape of vertebrae HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Trunk curl HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Naive CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Body length HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.012603 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Body length HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.055531 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Cortical Bone MicroCT / Cortical Bone Mineral Density HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thyroid HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thyroid HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thyroid HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thyroid HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Plasmacytoid DC - % of DC HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Lens Opacity HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Lens Opacity HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ mature NK cells - % of mature NK cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - back paws HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / LDL-cholesterol HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.31401 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimbs - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Conventional DC (cDC) - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Periphery distance travelled HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.082558 Success
Ydjctm1(KOMP)Wtsi WTSI Vertebral Microradiography / Vertebral Height HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Ly6Clow monocyte percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Follicular B cells - % of B2 cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / CD8+CD44+CD62L- percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.20367 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindlimb size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Dark side time spent HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.11462 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Sleep light phase percent HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.015697 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Follicular B cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Zygomatic bone HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Latency to immobility HOM 5f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.16366 Success
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Latency to immobility HOM 0f:4m Mixed Model framework, generalized least squares, equation withoutWeight 0.42088 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Calcium HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.82759 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Calcium HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.98018 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Shape of ribs HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD4+ T helper cells - % of CD4+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - ear HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Grip Strength / Forelimb and hindlimb grip strength normalised against body weight HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.53619 Success
Ydjctm1(KOMP)Wtsi WTSI Grip Strength / Forelimb and hindlimb grip strength normalised against body weight HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.55230 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb nail - number HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Salmonella Challenge / Caecal Contents bacterial count HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Macrophages - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Intraperitoneal glucose tolerance test (IPGTT) / Area under glucose response curve HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0056858 Success
Ydjctm1.1(KOMP)Vlcg JAX Intraperitoneal glucose tolerance test (IPGTT) / Area under glucose response curve HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0093525 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ alpha beta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail length HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Rotarod / Learning slope HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.33901 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI3 HOM 8f:4m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0048679 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI3 HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.63523 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Potassium HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.010186 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Potassium HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.080044 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4- NKT cells - % of NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Myeloid cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 30kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 30kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / 30kHz-evoked ABR Threshold HOM 0f:4m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Phosphorus HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.095681 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Phosphorus HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.75639 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindpaw - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Germinal centre B cells - % of B2 cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Viability Primary Screen / Outcome HOM 38f:35m Supplied as data 0.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Viability Primary Screen / Outcome HOM 38f:35m Supplied as data 0.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Viability Primary Screen / Outcome HOM 66f:81m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Genitalia - morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lymph node HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lymph node HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lymph node HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lymph node HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Plasmacytoid DC - % of DC HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head bobbing/circling HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Head morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / ST HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.10869 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw nail colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Indirect Calorimetry / Respiratory Exchange Ratio HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.014260 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Digit coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / B1a cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Corneal vascularization HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Corneal vascularization HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Retinal Blood Vessels Pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Retinal Blood Vessels Pattern HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Triglycerides HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.33392 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Triglycerides HOM 4f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.43726 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head size HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Platelet count HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.27120 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Platelet count HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.33097 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / External genitalia HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ CD44+ CD62L- alpha beta effector T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindlimb morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Follicular B cells - % of B2 cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Transfer arousal HOM 7f:7m Fisher Exact Test framework 0.21477 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ KLRG1+ alpha beta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thymus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thymus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thymus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Thymus HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Gamma delta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Pupil Position HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Pupil Position HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimbs - position HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ CD44+ CD62L- alpha beta effector T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Average volume of LC HOM 2f:2m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Scoliosis HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Incisor colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Plasmacytoid DC - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Time mobile light side HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.020583 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimbs - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Neutrophil percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Early germinal centre B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Fusion of vertebrae HOM 7f:7m Fisher Exact Test framework 0.61845 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Tibia HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Tail - morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Conventional DC (cDC) - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color pattern - abdomen HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Iris transilumination HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD5+ gd T cells - % of gd T cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Time immobile HOM 5f:4m Mixed Model framework, generalized least squares, equation withoutWeight 0.10671 Success
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Time immobile HOM 0f:4m Mixed Model framework, generalized least squares, equation withoutWeight 0.60995 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Grip Strength / Forelimb and hindlimb grip strength measurement mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.042111 Success
Ydjctm1(KOMP)Wtsi WTSI Grip Strength / Forelimb and hindlimb grip strength measurement mean HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.14185 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw footpad skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ alpha beta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4+ T cells - % of ab T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Digit coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod b-wave amplitude-left HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Lens HOM 8f:8m Fisher Exact Test framework 0.30758 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Lens HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / QTc HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.11657 Success
Ydjctm1.1(KOMP)Vlcg JAX Grip Strength / Forelimb grip strength normalised against body weight HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.093155 Success
Ydjctm1(KOMP)Wtsi WTSI Grip Strength / Forelimb grip strength normalised against body weight HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.45232 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Head size HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 0.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD11b-high cDC - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Center average speed HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0089219 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / KLRG1+ mature NK cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Sodium HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 2.8389E-05 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Sodium HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.29901 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Sleep dark phase percent HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.79505 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forepaw - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / T cell CD3+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.58532 Success
Ydjctm1(KOMP)Wtsi WTSI Femoral Microradiography / Femur Length HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total B cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Germinal centre B cells - % of CD45+ HOM 6f:6m Manual 0.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Bone Mineral Content (excluding skull) HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.034738 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Bone Mineral Content (excluding skull) HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.17376 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ NKT cells - % of NKT cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Corneal touch reflex HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD11b-low cDC - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Contact righting reflex HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - snout HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skin HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skin HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skin HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skin HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw nail morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / HDL-cholesterol HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.00027994 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / HDL-cholesterol HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.015123 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Persistence of hyaloid vascular system HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Persistence of hyaloid vascular system HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI2 HOM 8f:4m Mixed Model framework, linear mixed-effects model, equation withWeight 0.059987 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI2 HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.77335 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Eye HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Granulocytes - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Dark sleep bout lengths standard deviation HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.38566 Success
Ydjctm1(KOMP)Wtsi WTSI Vertebra Compression / Vertebra Yield Load HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI X-ray / Maxilla/Pre-maxilla HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Salmonella Challenge / Spleen bacterial count HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Mature NK cells - % of NK cellls HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Mouth morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Gait (inc. ataxia) HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Naive CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Caudal processes HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindlimb HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Head bobbing HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total B2 cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Heart Weight / Tibia length HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / rMSSD HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.41988 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of ribs right HOM 7f:7m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - ear HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total DC - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ CD25+ alpha beta regulatory T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Alpha-amylase HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.00077130 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Dark sleep bout lengths mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.058308 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / PR HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.42027 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Iron HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.048872 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Iron HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.078431 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Transitional 1 B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Magnesium HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.98203 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Convulsions HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Genitalia - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Periphery permanence time HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.15878 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Plasmacytoid DC - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb nail - length HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw digit size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Monocyte number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Salmonella Challenge / Pre-Day 14 Death HOM 0f:3m - 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw digit fusion HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Average branch length of LC HOM 2f:2m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Average branch length of LC HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD103+ CD11b-low cDC - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Aggression HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod b-wave amplitude-right HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Grip Strength / Forelimb grip strength measurement mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.027303 Success
Ydjctm1(KOMP)Wtsi WTSI Grip Strength / Forelimb grip strength measurement mean HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.90014 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimbs - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Startle response HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Three-point Bend / Energy Dissipated Prior to Fracture HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI DSS Histology / Pre-Day 10 Death HOM 2f:2m - 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Gall bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Gall bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Gall bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Gall bladder HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Sleep daily percent HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.13579 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Femur HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Eosinophil number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Germinal centre B cells - % of B2 cells HOM 6f:6m Manual 0.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Cornea HOM 7f:7m Fisher Exact Test framework 0.018043 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Cornea HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Free fatty acids HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.31744 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Free fatty acids HOM 3f:7m Not processed 1.0000 FAILED - Not enough data points in dependent variable 'IMPC_CBC_026_001' for genotype/sex combinations to allow the application of MM/TF framework. Threshold used: 4.
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 12kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / 12kHz-evoked ABR Threshold HOM 0f:4m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 12kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Eosinophil percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Immature B cells (Hardy fraction E) - % of B220+ HOM 4f:4m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Bone Mineral Density (excluding skull) HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0025901 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Bone Mineral Density (excluding skull) HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.41900 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Follicular B cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna position HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Red blood cell count HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 1.9179E-07 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Red blood cell count HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0080155 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Fecal boli HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.00048256 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw digit count HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - tail HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / Mature B cell IgD+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.037199 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Vibrissae - appearance HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Iris Pigmentation HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Iris Pigmentation HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Mature NK cells - % of lymphocytes HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ KLRG1+ alpha beta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw footpad skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD11b-high cDC - % of cDC HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Granulocytes - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / T cell CD4+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.43374 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Startle response HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Thoracic processes HOM 7f:7m Fisher Exact Test framework 0.65075 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Humerus HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Large intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Large intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Large intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Large intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Limb grasp HOM 8f:8m Fisher Exact Test framework 0.39051 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Total B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / NK cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Urea (Blood Urea Nitrogen - BUN) HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.26882 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Urea (Blood Urea Nitrogen - BUN) HOM 4f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.60600 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color pattern - head HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD5+ gd T cells - % of gd T cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Genitalia - presence HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of lumbar vertebrae HOM 7f:7m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Lordosis HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Eosinophils - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Memory B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Ulna HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Sacral processes HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb digit - number HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw digit count HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total DC - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Stomach HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Stomach HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Stomach HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Stomach HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Hole-board Exploration / Total holepokes HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.48404 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Tail - length HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Cone b-wave amplitude HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / External genitalia size HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Digit coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of caudal vertebrae HOM 7f:7m 0.78972 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Unexpected behaviors HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / NK cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - Global HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.43116 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of ribs left HOM 7f:7m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Memory B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw nail colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimbs - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - front paws HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Bone Area HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.053948 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Bone Area HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.084696 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4+ T cells - % of ab T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod b-wave implicit time HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Transitional 2 B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / IgD+ mature B cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Average roundness of LC HOM 2f:2m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Heart HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Heart HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Heart HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Heart HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw digit morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimbs - position HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Mature B cells (Hardy fraction F) - % of B220+ HOM 4f:4m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Cone b-wave amplitude-left HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw digit size HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Trachea HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Trachea HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Trachea HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Trachea HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - front paws HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Transitional 2 B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Cone b-wave amplitude-right HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair texture / appearance - abdomen HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Mature B cells (Hardy fraction F) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ KLRG1+ alpha beta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Glucose HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 8.6222E-08 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Glucose HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.33269 Success
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Time mobile dark side HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.00056447 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Fertility of Homozygous Knock-out Mice / Gross Findings Female HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Fertility of Homozygous Knock-out Mice / Gross Findings Female HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pre-pro B cells (Hardy fraction A) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Skull shape HOM 7f:7m Fisher Exact Test framework 0.28890 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb nail - number HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD8+ T cells - % of ab T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod a-wave implicit time HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / QRS HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.32945 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forelimb HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Small intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Small intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Small intestine HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Small intestine HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Langerhans cell (LC) count HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Langerhans cell (LC) count HOM 2f:2m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Digit coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Tail - presence HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod a-wave amplitude HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Chloride HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.012516 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Chloride HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.20631 Success
Ydjctm1.1(KOMP)Vlcg JAX Insulin Blood Level / Insulin HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.022514 Success
Ydjctm1(KOMP)Wtsi WTSI Insulin Blood Level / Insulin HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.35839 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ mature NK cells - % of lymphocytes HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ CD25+ alpha beta regulatory T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI4 HOM 0f:4m Mixed Model framework, generalized least squares, equation withoutWeight 0.039897 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Lean mass HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 1.5345E-05 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Lean mass HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0017468 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Pupil Light Response HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Pupil Light Response HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Corneal opacity HOM 7f:7m Fisher Exact Test framework 0.38634 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Corneal opacity HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD11b-low cDC - % of cDC HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / Treg cell CD25+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.056033 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Monocytes - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of pelvic vertebrae HOM 7f:7m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Shape of ribcage HOM 7f:7m Fisher Exact Test framework 0.030336 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tremor HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb digit - number HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Hematology / White blood cell count HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.57668 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / White blood cell count HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.92868 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4+ NKT cells - % of NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Marginal zone B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb digit - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Alanine aminotransferase HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0080428 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Alanine aminotransferase HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.060022 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb nail - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / RR HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.46380 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - whole body HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Eosinophils - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Trunk curl HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Plasma cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Naive CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Creatinine HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.11498 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Marginal zone precursor B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of thoracic vertebrae HOM 7f:7m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4+ T helper cells - % of CD4+ T helper cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / B1a cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Trabecular Bone MicroCT / Trabecular Thickness (mm) HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Memory B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Radius HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Hematology / Mean platelet volume HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.094178 Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Percentage center time HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.15938 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / NKT cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI X-ray / Brachydactyly HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Vibrissae - presence HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Lower teeth appearance HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Scapulae HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw nail morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4- NKT cells - % of NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / Monocyte percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.92661 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Alpha beta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD4+ T helper cells - % of CD4+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw digit fusion HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Naive CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Plasma cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Immature NK cells - % of lymphocytes HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Retina (combined) HOM 7f:7m Not processed Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Retina (combined) HOM 8f:8m Not processed Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spleen HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spleen HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spleen HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spleen HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Polysyndactylism HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Contact righting HOM 8f:8m Fisher Exact Test framework 0.00032855 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Hematocrit HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 4.3438E-06 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Hematocrit HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0043063 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Esophagus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Esophagus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Esophagus HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Esophagus HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Antigen Specific Immunoglobulin Assay / TetC specific total IgG HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Memory B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair texture / appearance - head HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Immature B cells (Hardy fraction E) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Vibrissae shape HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Creatine kinase HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.40009 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Ly6Clow monocyte number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color - abdomen HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ CD44+ CD62L- alpha beta effector T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Pupil Dilation HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Pupil Dilation HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD103+ CD11b-low cDC - % of CD11b-low cDC HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pro-B cells (Hardy fraction C) - % of B220+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Fat mass HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.15516 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Fat mass HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.38171 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / KLRG1+ mature NK cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Three-point Bend / Stiffness HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Thyroxine HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.27298 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Tremor HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Brain HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Brain HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Brain HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Brain HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Transitional 1 B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Indirect Calorimetry / Total water intake HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0077530 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forelimb size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail elevation HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Light sleep bout lengths mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.036343 Success
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod b-wave amplitude HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Upper teeth appearance HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Center distance travelled HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.78324 Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / T cell CD8+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.87881 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / 18kHz-evoked ABR Threshold HOM 0f:4m 0.073141 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 18kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 18kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Percent time in dark HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.92914 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD103+ CD11b-low cDC - % of CD11b-low cDC HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / B cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Electroconvulsive Threshold Testing / mA threshold inducing clonic seizure HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.26128 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Clavicle HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Marginal zone B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total Treg cells - % of CD4+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / PQ HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.44058 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Light sleep bout lengths standard deviation HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.53649 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Activity (body position) HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Liver HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Liver HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Liver HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Liver HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Trabecular Bone MicroCT / Trabecular Spacing (mm) HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / NK cell percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0061144 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4- NKT cells - % of CD4- NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb digit - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Late germinal centre B cells - % of GC cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Digit integrity HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Marginal zone precursor B cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4+ NKT cells - % of NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw nail length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin texture - snout HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Total protein HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.049085 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Total protein HOM 4f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.072741 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Fat/Body weight HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.036460 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Fat/Body weight HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.090418 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of cervical vertebrae HOM 7f:7m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total B2 cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Eyelid closure HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Eyelid closure HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head coat/hair colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Three-point Bend / Fracture Load HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Ly6Chigh monocyte number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / Granulocyte Gr1+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.087160 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pre-B cells (Hardy fraction D) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Breath rate during sleep standard deviation HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.13963 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Gamma delta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Aspartate aminotransferase HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0036625 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Aspartate aminotransferase HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.55527 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb nail - length HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Late germinal centre B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw digit morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting NK cells - % of NK cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Vocalization HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD5+ gd T cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ immature NK cells - % of lymphocytes HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Hemoglobin HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 1.5310E-09 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Hemoglobin HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.034540 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Plasma cells - % of B2 cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Whole arena resting time HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.27017 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Syndactylism HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Total T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Vitreous HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Teeth presence HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ NKT cells - % of lymphocytes HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total ab T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector gd cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forelimb morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD103+ CD11b-low cDC - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Optic Disc HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Optic Disc HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color pattern - back HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Narrow eye opening HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Narrow eye opening HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD11b-low cDC - % of cDC HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Glycerol HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0065861 Success
Ydjctm1.1(KOMP)Vlcg JAX Heart Weight / Heart weight HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.13857 Success
Ydjctm1(KOMP)Wtsi WTSI Heart Weight / Heart weight HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Vibrissae size HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pre-B cells (Hardy fraction D) - % of B220+ HOM 4f:4m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Vibrissae colour HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair texture / appearance - back HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lung HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lung HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lung HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Lung HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ KLRG1+ alpha beta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw footpad size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / IgD+ mature B cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Latency to first transition into dark HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.069713 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / Response amplitude - S HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.18437 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / Response amplitude - S HOM 8f:4m Mixed Model framework, linear mixed-effects model, equation withWeight 0.20733 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Pupil Shape HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Pupil Shape HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / QTc Dispersion HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.46417 Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Periphery average speed HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.61014 Success
Ydjctm1.1(KOMP)Vlcg JAX Fertility of Homozygous Knock-out Mice / Gross Findings Male HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Fertility of Homozygous Knock-out Mice / Gross Findings Male HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Cervical processes HOM 7f:7m Fisher Exact Test framework 0.027554 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD8+ T cells - % of ab T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Monocytes - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Pancreas HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Pancreas HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Pancreas HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Pancreas HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Three-point Bend / Yield Load HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw nail count HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Percent time in light HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.92914 Success
Ydjctm1(KOMP)Wtsi WTSI Cortical Bone MicroCT / Cortical Thickness HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spinal cord HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spinal cord HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spinal cord HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Spinal cord HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / Lean/Body weight HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.00031609 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / Lean/Body weight HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.014405 Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / NKT cell percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.42638 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ alpha beta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Plasma cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Distance travelled - total HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.20682 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Snout size HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / Click-evoked ABR threshold HOM 0f:4m 0.51496 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Synechia HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Synechia HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 24kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Auditory Brain Stem Response / 24kHz-evoked ABR Threshold HOM 2f:2m 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Auditory Brain Stem Response / 24kHz-evoked ABR Threshold HOM 0f:4m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Total cholesterol HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0063316 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Total cholesterol HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.16041 Success
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Light side time spent HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.11462 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Monocyte percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Albumin HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0012085 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Albumin HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.81249 Success
Ydjctm1.1(KOMP)Vlcg JAX Intraperitoneal glucose tolerance test (IPGTT) / Initial response to glucose challenge HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.018529 Success
Ydjctm1(KOMP)Wtsi WTSI Intraperitoneal glucose tolerance test (IPGTT) / Initial response to glucose challenge HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.16767 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / HR HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.42724 Success
Ydjctm1(KOMP)Wtsi WTSI Antigen Specific Immunoglobulin Assay / TetC specific IgG1 HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI X-ray / Transitional vertebrae HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Early germinal centre B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Pelvis HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Adrenal gland HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Adrenal gland HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Adrenal gland HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Adrenal gland HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Late germinal centre B cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna rotation HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total ab T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Urinary bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Urinary bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Urinary bladder HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Urinary bladder HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Shape of spine HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Eyelid morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Eyelid morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Mean cell volume HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.43205 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Mean cell volume HOM 7f:7m Not processed 1.0000 FAILED - Insufficient variability in dependent variable 'IMPC_HEM_005_001' for MM/TF framework. Fisher Exact Test can be better way to do the analysis.
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color - back HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forelimb digit - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pro-B cells (Hardy fraction C) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Vertebra Compression / Vertebra Max Load HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Femoral Microradiography / Femoral Bone Mineral Content HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD11b-low cDC - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Center permanence time HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.15938 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindpaw - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD11b-high cDC - % of cDC HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Upper lip morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Locomotor activity HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.020783 Success
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / B cell CD19+ percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.15587 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna skin colour HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Positional passivity HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skeletal muscle HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skeletal muscle HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skeletal muscle HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Skeletal muscle HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw nail length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head coat/hair colour pattern HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Digit coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Macrophages - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Breath rate during sleep mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.24999 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / HRV HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.42164 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI1 HOM 0f:4m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.39083 Success
Ydjctm1.1(KOMP)Vlcg JAX Acoustic Startle and Pre-pulse Inhibition (PPI) / % Pre-pulse inhibition - PPI1 HOM 8f:4m Mixed Model framework, generalized least squares, equation withoutWeight 0.69056 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Retinal Blood Vessels HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Retinal Blood Vessels HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Trabecular Bone MicroCT / Trabecular Number (mm-1) HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Early germinal centre B cells - % of GC cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD8+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total gd T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD4+ NKT cells - % of CD4+ NKT cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Mandibles HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Vibrissae HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Sleep bout lengths mean HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.024878 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Ventral coat/hair presence HOM 7f:7m Fisher Exact Test framework 0.025664 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna touch reflex HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Ly6C+ immature NK cells - % of immature NK cells HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - back paws HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod a-wave amplitude-right HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector Treg cells - % of Treg HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Mouth morphology HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Granulocytes - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Effector CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - whole body HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI X-ray / Number of digits HOM 7f:7m 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair distribution - abdomen HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Anti-nuclear antibody assay / ANA score HOM 0f:3m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Anti-nuclear antibody assay / ANA score HOM 3f:0m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Rotarod / Average duration HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.60158 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Resting NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Total T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Ly6Chigh monocyte percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI DSS Histology / Average histology score HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Incisors HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - hair distribution - head HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pro-B cells (Hardy fraction B) - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Hindpaw size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Plasma cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Vertebral Microradiography / Vertebral Bone Mineral Content HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Fructosamine HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.0039727 Success
Ydjctm1.1(KOMP)Vlcg JAX Light-Dark Test / Side changes HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 2.9781E-05 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Corneal Sclerization HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Anti-nuclear antibody assay / ANA classification HOM 3f:0m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Anti-nuclear antibody assay / ANA classification HOM 0f:3m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Alkaline phosphatase HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 3.3561E-05 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Alkaline phosphatase HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.014793 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Eye Hemorrhage or Blood Presence HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Eye Hemorrhage or Blood Presence HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb nail - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Number of rears - total HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.43348 Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Teeth HOM 7f:7m Fisher Exact Test framework 0.22320 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Paw coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Immature NK cells - % of NK cells HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Cortical Bone MicroCT / Internal Diameter HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD4+ T helper cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD4+ alpha beta T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Buffy coat peripheral blood leukocyte immunophenotyping / CD4+CD44+CD62L- percentage HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.76857 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Fusion between cornea and lens HOM 7f:7m Fisher Exact Test framework 0.31647 Success
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Fusion between cornea and lens HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Antigen Specific Immunoglobulin Assay / TetC specific IgG2 HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Coat - color - head HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Hematology / Mean corpuscular hemoglobin HOM 5f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.040177 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Mean corpuscular hemoglobin HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.15012 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Tail coat/hair presence HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total CD4+ T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw size HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ NK cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Hindlimb digit - shape HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Intraperitoneal glucose tolerance test (IPGTT) / Fasted blood glucose concentration HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.0092146 Success
Ydjctm1(KOMP)Wtsi WTSI Intraperitoneal glucose tolerance test (IPGTT) / Fasted blood glucose concentration HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.33615 Success
Ydjctm1.1(KOMP)Vlcg JAX Clinical Chemistry / Total bilirubin HOM 6f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.35067 Success
Ydjctm1(KOMP)Wtsi WTSI Clinical Chemistry / Total bilirubin HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.94596 Success
Ydjctm1.1(KOMP)Vlcg JAX Electrocardiogram (ECG) / CV HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.49016 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Forepaw - size HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / T cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Fusion of ribs HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Limb grasping HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Conventional DC (cDC) - % of DC HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Body Composition (DEXA lean/fat) / BMC/Body weight HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.013564 Success
Ydjctm1(KOMP)Wtsi WTSI Body Composition (DEXA lean/fat) / BMC/Body weight HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withoutWeight 0.99393 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / KLRG1+ gd T cells - % of gd T cells HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Lower lip morphology HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Head coat/hair appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Forepaw nail count HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Peak wake with respect to dark onset median HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.030071 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Neutrophil number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Vertebra Compression / Vertebra Stiffness HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Eye Morphology / Retinal Blood Vessels Structure HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Eye Morphology / Retinal Blood Vessels Structure HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Germinal centre B cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / CD11b-high cDC - % of CD45+ HOM 2f:2m Manual 1.0000 Not processed - Data analysis pending
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / CD8+ CD44+ CD62L- alpha beta effector T cell number HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI X-ray / Joints HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Resting CD8+ T cells - % of CD8+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / KLRG1+ Treg cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Climbing HOM 5f:4m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Tail Suspension / Climbing HOM 0f:4m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Pinna skin appearance HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Gait HOM 8f:8m Fisher Exact Test framework 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Kidney HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Kidney HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Kidney HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Kidney HOM f:m Supplied as data Success
Ydjctm1(KOMP)Wtsi WTSI X-ray / Fusion of processes HOM 7f:7m Fisher Exact Test framework 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Hematology / Red blood cell distribution width HOM 7f:7m Mixed Model framework, linear mixed-effects model, equation withWeight 0.36414 Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Ears HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Snout size HOM 7f:7m Fisher Exact Test framework 0.14136 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total CD4+ NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Whole blood peripheral blood leukocyte immunophenotyping / Alpha beta T cell percentage HOM 1f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Ear epidermis immunophenotyping / Average no of branches on LC HOM 2f:2m Manual 1.0000 Success
Ydjctm1.1(KOMP)Vlcg JAX Rotarod / Learning difference HOM 8f:8m Mixed Model framework, generalized least squares, equation withoutWeight 0.23277 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / CD5+ gd T cells - % of CD45+ HOM 0f:0m Manual Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Effector CD4- NKT cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Bone marrow immunophenotyping / Pro-B cells (Hardy fraction B) - % of B220+ HOM 0f:0m Manual Success
Ydjctm1.1(KOMP)Vlcg JAX Open Field / Whole arena average speed HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.20452 Success
Ydjctm1(KOMP)Wtsi WTSI Three-point Bend / Max Load HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Sleep Wake / Sleep bout lengths standard deviation HOM 8f:8m Mixed Model framework, linear mixed-effects model, equation withWeight 0.35315 Success
Ydjctm1(KOMP)Wtsi WTSI Mesenteric Lymph Node Immunophenotyping / Total T cells - % of CD45+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Spleen Immunophenotyping / Total Treg cells - % of CD4+ HOM 6f:6m Manual 1.0000 Success
Ydjctm1(KOMP)Wtsi WTSI Salmonella Challenge / Liver bacterial count HOM 0f:3m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1(KOMP)Wtsi WTSI Combined SHIRPA and Dysmorphology / Dorsal coat/hair length HOM 7f:7m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1.1(KOMP)Vlcg JAX Electroretinography 2 / Rod a-wave amplitude-left HOM 2f:2m Not processed 1.0000 FAILED - Not enough mutant or control data
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Eye with optic nerve HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Eye with optic nerve HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Eye with optic nerve HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Gross Pathology and Tissue Collection / Eye with optic nerve HOM f:m Supplied as data Success
Ydjctm1.1(KOMP)Vlcg JAX Combined SHIRPA and Dysmorphology / Skin color - tail HOM 8f:8m Fisher Exact Test framework 1.0000 Not tested (No variation) - OK
Ydjctm1(KOMP)Wtsi WTSI Trabecular Bone MicroCT / Bone Volume/Tissue Volume (%) HOM 2f:0m Not processed 1.0000 FAILED - Not enough mutant or control data

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